Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC091874.1-201ENST00000511402 339 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 NACAP3-201ENST00000552100 481 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 SNORA43.4-201ENST00000629559 138 ntBASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.61□□□□□ -1.67
CUEDC1Q9NWM3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 SNORA8.3-201ENST00000384679 139 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP332-201ENST00000391063 115 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 MIR1193-201ENST00000408109 78 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 CKS1BP6-201ENST00000424932 240 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 AC112220.1-201ENST00000434628 355 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 MTATP6P7-201ENST00000453315 681 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 RN7SKP21-201ENST00000516503 220 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 AC024581.2-201ENST00000619986 252 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 AC091932.3-201ENST00000624223 323 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 MAPK10-286ENST00000641208 8747 ntBASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.6□□□□□ -1.67
CUEDC1Q9NWM3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 RNU1-108P-201ENST00000362556 161 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP295-201ENST00000362655 121 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-873P-201ENST00000363833 107 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 snoU2_19.4-201ENST00000364329 80 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-460P-201ENST00000391158 108 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AC009963.1-201ENST00000417265 157 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AC138623.1-201ENST00000418060 216 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 U8.19-201ENST00000459095 133 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 SCARNA22-201ENST00000503991 125 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AC006445.2-201ENST00000510061 472 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 RNU2-56P-201ENST00000516826 190 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 AC107016.1-201ENST00000550463 337 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 MTND5P35-201ENST00000557537 1720 ntBASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.59□□□□□ -1.67
CUEDC1Q9NWM3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.59□□□□□ -1.68
CUEDC1Q9NWM3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CUEDC1Q9NWM3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CUEDC1Q9NWM3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 RNA5SP31-201ENST00000411144 127 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 RPS20P14-201ENST00000412545 360 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC006461.1-201ENST00000412637 326 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC092047.1-201ENST00000424997 240 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 SNRPEP9-201ENST00000436794 238 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 MTND5P34-201ENST00000568888 325 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 MIR5582-201ENST00000579697 68 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC136601.2-201ENST00000604356 474 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC013791.1-201ENST00000616619 62 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 MIR8069-1-201ENST00000616627 86 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 MIR8069-2-201ENST00000621412 86 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 U6.95-201ENST00000636931 70 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 MIR3914-2-201ENST00000637339 95 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 AC002546.1-201ENST00000588041 2504 ntBASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUEDC1Q9NWM3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms