Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 HMGB1P24-202ENST00000615653 685 ntBASIC3.37□□□□□ -1.87
RNF31Q96EP0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF31Q96EP0 AC099506.2-201ENST00000623074 221 ntBASIC3.37□□□□□ -1.87
RNF31Q96EP0 U2.21-201ENST00000637295 81 ntBASIC3.37□□□□□ -1.87
RNF31Q96EP0 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
RNF31Q96EP0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RNF31Q96EP0 ZNF826P-207ENST00000622273 1910 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF31Q96EP0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF31Q96EP0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF31Q96EP0 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 SNORD50.1-201ENST00000362987 71 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 U3.6-201ENST00000363622 211 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RNU6-595P-201ENST00000363944 107 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 Y_RNA.380-201ENST00000365663 111 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF31Q96EP0 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RNU6-72P-201ENST00000384285 79 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RNF31Q96EP0 RNU6-907P-201ENST00000390924 102 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RPS29P13-201ENST00000402041 169 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 MIR1302-3-201ENST00000408128 138 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF31Q96EP0 RPL21P2-201ENST00000440049 481 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RPS29P27-201ENST00000463711 170 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC133134.1-201ENST00000466800 359 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RN7SL283P-201ENST00000489055 303 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 RPL30P5-201ENST00000494923 336 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 SNORA40.14-201ENST00000516543 86 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC109479.2-201ENST00000517842 174 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AP002404.1-201ENST00000532005 451 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC005476.1-201ENST00000554427 397 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 HSBP1P1-201ENST00000555205 166 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 CYCSP39-201ENST00000565821 309 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC004852.3-201ENST00000614131 326 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 AC090617.7-201ENST00000623952 126 ntBASIC3.36□□□□□ -1.87
RNF31Q96EP0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF31Q96EP0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF31Q96EP0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF31Q96EP0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 RNU6-217P-201ENST00000384164 104 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 RNU6-140P-201ENST00000384566 108 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR521-1-201ENST00000384902 87 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 Z92545.1-201ENST00000411782 234 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 CBX3P6-201ENST00000430257 527 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC079354.2-201ENST00000453523 154 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 U8.21-201ENST00000459536 136 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 RPL22P13-201ENST00000493291 347 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 Y_RNA.668-201ENST00000516233 93 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 RN7SKP209-201ENST00000516888 304 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AP005902.1-201ENST00000521358 186 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC131281.1-201ENST00000522984 164 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC011602.1-201ENST00000546484 331 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 MYL12BP1-201ENST00000569826 507 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC004584.2-201ENST00000570407 410 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC016727.2-201ENST00000603988 621 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC124312.5-201ENST00000604451 268 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 AC009318.2-201ENST00000610917 651 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR1244-1-201ENST00000612829 85 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR1244-3-201ENST00000635744 85 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR1244-2-201ENST00000636449 85 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 MIR1244-4-202ENST00000636813 85 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 U4.7-201ENST00000638126 106 ntBASIC3.35□□□□□ -1.87
RNF31Q96EP0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF31Q96EP0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF31Q96EP0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
RNF31Q96EP0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF31Q96EP0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
RNF31Q96EP0 RNU6-78P-201ENST00000362897 107 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 RNU6-238P-201ENST00000363313 106 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 RNU6-336P-201ENST00000364891 107 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 MIR518D-201ENST00000385014 87 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 RPL21P1-201ENST00000399532 476 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 MIR1252-201ENST00000408861 65 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF31Q96EP0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms