Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC007656.2-201ENST00000624902 4547 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NCBP3Q53F19 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NCBP3Q53F19 RNY3P2-201ENST00000362918 102 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 RNU6-486P-201ENST00000363116 107 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 MIR143-201ENST00000385300 106 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.24□□□□□ -1.25
NCBP3Q53F19 RPL7AP28-201ENST00000464513 571 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NCBP3Q53F19 RPS26P48-201ENST00000491713 339 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 AC096577.2-201ENST00000611455 153 ntBASIC7.24□□□□□ -1.25
NCBP3Q53F19 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NCBP3Q53F19 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NCBP3Q53F19 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 MIR323A-201ENST00000362199 86 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 RNU1-57P-201ENST00000384491 166 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 SNORD77.3-201ENST00000391113 65 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 AL031121.1-201ENST00000406553 254 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.23□□□□□ -1.25
NCBP3Q53F19 RNA5SP360-201ENST00000516555 118 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.23□□□□□ -1.25
NCBP3Q53F19 MIR3117-201ENST00000584034 78 ntBASIC7.23□□□□□ -1.25
NCBP3Q53F19 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NCBP3Q53F19 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NCBP3Q53F19 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 SDHCP2-201ENST00000398565 501 ntBASIC7.22□□□□□ -1.25
NCBP3Q53F19 RN7SKP206-201ENST00000410823 293 ntBASIC7.22□□□□□ -1.25
NCBP3Q53F19 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 MRPS17P9-201ENST00000511924 393 ntBASIC7.22□□□□□ -1.25
NCBP3Q53F19 RN7SKP209-201ENST00000516888 304 ntBASIC7.22□□□□□ -1.25
NCBP3Q53F19 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NCBP3Q53F19 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NCBP3Q53F19 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 OR51H2P-202ENST00000641424 3046 ntBASIC7.22□□□□□ -1.25
NCBP3Q53F19 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
NCBP3Q53F19 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NCBP3Q53F19 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
NCBP3Q53F19 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
NCBP3Q53F19 RNU6-690P-201ENST00000365242 106 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 RNU6-975P-201ENST00000384296 105 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 MIR548D2-201ENST00000384955 97 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 SNORA48.4-201ENST00000391089 134 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 RN7SKP286-201ENST00000410894 299 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 AL353689.1-201ENST00000438895 199 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 RPL23AP67-201ENST00000465341 474 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 Xist_exon1.1-201ENST00000618930 85 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 AC006435.5-201ENST00000624486 112 ntBASIC7.21□□□□□ -1.26
NCBP3Q53F19 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
NCBP3Q53F19 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NCBP3Q53F19 AL731532.1-201ENST00000623972 4236 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NCBP3Q53F19 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.2□□□□□ -1.26
NCBP3Q53F19 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.2□□□□□ -1.26
NCBP3Q53F19 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC7.2□□□□□ -1.26
NCBP3Q53F19 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NCBP3Q53F19 RNU6-888P-201ENST00000363010 101 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 RN7SKP145-201ENST00000363291 303 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 SNORD32B-201ENST00000364460 84 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 RNU6-279P-201ENST00000391297 101 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 EEF1B2P6-201ENST00000445713 673 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 AC112771.1-201ENST00000463581 102 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 RN7SL466P-201ENST00000497546 295 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 SCARNA20.4-201ENST00000516969 131 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 MIR3690-201ENST00000580266 75 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 AL691477.1-201ENST00000624398 162 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 AL162726.3-218ENST00000636401 95 ntBASIC7.2□□□□□ -1.26
NCBP3Q53F19 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NCBP3Q53F19 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
NCBP3Q53F19 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
NCBP3Q53F19 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.19□□□□□ -1.26
NCBP3Q53F19 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.19□□□□□ -1.26
NCBP3Q53F19 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NCBP3Q53F19 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NCBP3Q53F19 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NCBP3Q53F19 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC7.19□□□□□ -1.26
NCBP3Q53F19 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NCBP3Q53F19 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.19□□□□□ -1.26
NCBP3Q53F19 RNA5SP183-201ENST00000362452 119 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms