Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RPL21P90-201ENST00000415692 466 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 SNX2P2-201ENST00000424553 323 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 AL591212.2-201ENST00000433923 257 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S2P59780 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.83□□□□□ -2.28
AP3S2P59780 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.83□□□□□ -2.28
AP3S2P59780 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.83□□□□□ -2.28
AP3S2P59780 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.83□□□□□ -2.28
AP3S2P59780 RNA5SP481-201ENST00000516814 122 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 RNA5SP490-201ENST00000517141 136 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.83□□□□□ -2.28
AP3S2P59780 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.83□□□□□ -2.28
AP3S2P59780 MIR4513-201ENST00000581077 86 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 MZT1P2-201ENST00000604387 248 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP3S2P59780 AL354696.1-201ENST00000614652 497 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.83□□□□□ -2.28
AP3S2P59780 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
AP3S2P59780 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
AP3S2P59780 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
AP3S2P59780 Y_RNA.332-201ENST00000365271 113 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 RNU6-72P-201ENST00000384285 79 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 SNORD116-20-201ENST00000384529 92 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 SNORA40.2-201ENST00000390847 128 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 MIR320C1-201ENST00000408566 88 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 RNU2-7P-201ENST00000410794 178 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.82□□□□□ -2.28
AP3S2P59780 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.82□□□□□ -2.28
AP3S2P59780 AC108059.3-201ENST00000456388 214 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 RPL31P3-201ENST00000458430 332 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.82□□□□□ -2.28
AP3S2P59780 AC093852.1-201ENST00000503587 266 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AC009646.1-201ENST00000510455 318 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.82□□□□□ -2.28
AP3S2P59780 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.82□□□□□ -2.28
AP3S2P59780 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.82□□□□□ -2.28
AP3S2P59780 AL391001.1-201ENST00000602747 715 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AC022893.3-201ENST00000607665 437 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 AL365204.3-201ENST00000612448 685 ntBASIC0.82□□□□□ -2.28
AP3S2P59780 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
AP3S2P59780 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.81□□□□□ -2.28
AP3S2P59780 SNORD3E-201ENST00000362899 217 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RNU5A-8P-201ENST00000364102 114 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
AP3S2P59780 RNU6-224P-201ENST00000384055 107 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 MIR548B-201ENST00000385247 97 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.81□□□□□ -2.28
AP3S2P59780 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.81□□□□□ -2.28
AP3S2P59780 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.81□□□□□ -2.28
AP3S2P59780 AC092809.3-201ENST00000415453 231 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AL365400.1-201ENST00000431854 640 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.81□□□□□ -2.28
AP3S2P59780 MTCO1P27-201ENST00000448269 226 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AL513124.1-201ENST00000450410 614 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 SUMO2P5-201ENST00000506790 245 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RN7SKP88-201ENST00000516847 250 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 SNORD60.2-201ENST00000516883 86 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RNU6-677P-201ENST00000516914 101 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 RNU6-548P-201ENST00000517083 115 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 SUMO2P18-201ENST00000518873 252 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
AP3S2P59780 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.81□□□□□ -2.28
AP3S2P59780 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 7SK.8-201ENST00000612110 250 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 7SK.11-201ENST00000615477 250 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AL159153.1-201ENST00000619688 317 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 7SK.13-201ENST00000622040 250 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.81□□□□□ -2.28
AP3S2P59780 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.81□□□□□ -2.28
AP3S2P59780 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
AP3S2P59780 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
AP3S2P59780 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.8□□□□□ -2.28
AP3S2P59780 USP9YP33-201ENST00000412220 421 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.8□□□□□ -2.28
AP3S2P59780 CYCSP49-201ENST00000420810 319 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.8□□□□□ -2.28
AP3S2P59780 CALM1P1-201ENST00000442082 433 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 AL139824.2-201ENST00000458731 1095 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 MTND2P33-201ENST00000506452 1031 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 MTCO3P27-201ENST00000514397 196 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 MIR449C-201ENST00000516047 92 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 RNU5A-4P-201ENST00000516588 111 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 RNU6-1028P-201ENST00000517164 93 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 RNA5SP437-201ENST00000517249 129 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 AP003355.1-201ENST00000518956 587 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 AP000907.2-201ENST00000530827 353 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.8□□□□□ -2.28
AP3S2P59780 AC069114.2-201ENST00000604699 304 ntBASIC0.8□□□□□ -2.28
AP3S2P59780 AL355816.2-201ENST00000610049 647 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms