Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
SUMO3P55854 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.12□□□□□ -1.91
SUMO3P55854 ZNF826P-207ENST00000622273 1910 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SUMO3P55854 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SUMO3P55854 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
SUMO3P55854 MTND5P19-201ENST00000424872 1794 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 MTND5P9-201ENST00000503854 1755 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SNORD50.1-201ENST00000362987 71 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 Y_RNA.123-201ENST00000363338 102 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SNORD17-201ENST00000390930 237 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 RNU2-23P-201ENST00000410545 195 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC126124.2-201ENST00000413542 321 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC017079.2-201ENST00000416102 485 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC138623.1-201ENST00000418060 216 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 EIF1AXP1-201ENST00000419267 435 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 RPL31P12-201ENST00000422587 358 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.11□□□□□ -1.91
SUMO3P55854 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.11□□□□□ -1.91
SUMO3P55854 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
SUMO3P55854 AC021205.2-201ENST00000480069 347 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC027575.1-201ENST00000481064 460 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SEM1P1-201ENST00000506694 209 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.11□□□□□ -1.91
SUMO3P55854 SCARNA17.1-201ENST00000516211 143 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SNORA31.6-201ENST00000516241 130 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SCARNA17.2-201ENST00000516334 143 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 SNORA67.7-201ENST00000516664 135 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC079598.5-201ENST00000547460 117 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AC093249.1-201ENST00000567049 203 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.11□□□□□ -1.91
SUMO3P55854 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.11□□□□□ -1.91
SUMO3P55854 SCARNA17.4-201ENST00000614296 143 ntBASIC3.11□□□□□ -1.91
SUMO3P55854 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SUMO3P55854 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SUMO3P55854 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SUMO3P55854 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SUMO3P55854 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.1□□□□□ -1.91
SUMO3P55854 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SUMO3P55854 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
SUMO3P55854 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.1□□□□□ -1.91
SUMO3P55854 AL359854.1-201ENST00000614203 1594 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RNU6-1285P-201ENST00000363480 105 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RNU6-890P-201ENST00000384121 107 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RN7SKP61-201ENST00000410642 295 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RNU6-55P-201ENST00000411092 107 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.1□□□□□ -1.91
SUMO3P55854 CYCSP48-201ENST00000417124 323 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SUMO3P55854 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.1□□□□□ -1.91
SUMO3P55854 BX276092.3-201ENST00000424182 230 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 SNORA84-201ENST00000459229 133 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 FO393415.2-201ENST00000480085 343 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RPL36AP48-201ENST00000485521 314 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC104564.1-201ENST00000493028 407 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 SCARNA16.2-201ENST00000516520 172 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC115990.1-201ENST00000526957 301 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SUMO3P55854 BNIP3P22-201ENST00000593399 556 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.1□□□□□ -1.91
SUMO3P55854 RPL23AP78-201ENST00000599928 470 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC009318.2-201ENST00000610917 651 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AL159153.1-201ENST00000619688 317 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 AC092608.2-201ENST00000624427 218 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SUMO3P55854 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SUMO3P55854 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SUMO3P55854 MTND5P30-201ENST00000452896 1731 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
SUMO3P55854 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SUMO3P55854 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SUMO3P55854 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SUMO3P55854 RNA5SP50-201ENST00000363731 107 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SUMO3P55854 RNU6-142P-201ENST00000384019 107 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 MIR1289-1-201ENST00000408836 144 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.09□□□□□ -1.91
SUMO3P55854 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.09□□□□□ -1.91
SUMO3P55854 AC079354.2-201ENST00000453523 154 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
SUMO3P55854 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.09□□□□□ -1.91
SUMO3P55854 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 MIR4765-201ENST00000585007 77 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AC008739.3-201ENST00000603262 127 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 AC090971.5-201ENST00000621102 293 ntBASIC3.09□□□□□ -1.91
SUMO3P55854 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SUMO3P55854 ZNF299P-201ENST00000406845 1804 ntBASIC3.09□□□□□ -1.92
SUMO3P55854 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SUMO3P55854 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms