Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC107934.1-201ENST00000522215 217 ntBASIC0.92□□□□□ -2.26
RPL28P46779 BNIP3P6-201ENST00000549284 499 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.92□□□□□ -2.26
RPL28P46779 SNORA77B-201ENST00000578179 125 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AC005786.1-201ENST00000588553 154 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AL353778.1-201ENST00000603149 408 ntBASIC0.92□□□□□ -2.26
RPL28P46779 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.92□□□□□ -2.26
RPL28P46779 AC006338.1-201ENST00000618453 749 ntBASIC0.92□□□□□ -2.26
RPL28P46779 AC022513.1-201ENST00000624512 117 ntBASIC0.92□□□□□ -2.26
RPL28P46779 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
RPL28P46779 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
RPL28P46779 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
RPL28P46779 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
RPL28P46779 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RPL28P46779 U8.1-201ENST00000362843 134 ntBASIC0.91□□□□□ -2.26
RPL28P46779 RNU4-92P-201ENST00000363783 136 ntBASIC0.91□□□□□ -2.26
RPL28P46779 SNORA62.1-201ENST00000364287 154 ntBASIC0.91□□□□□ -2.26
RPL28P46779 RNU6-384P-201ENST00000364900 104 ntBASIC0.91□□□□□ -2.26
RPL28P46779 RPS20P2-201ENST00000402520 389 ntBASIC0.91□□□□□ -2.26
RPL28P46779 SNORA11.2-201ENST00000408318 127 ntBASIC0.91□□□□□ -2.26
RPL28P46779 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPL28P46779 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL28P46779 RPL23AP35-201ENST00000451906 501 ntBASIC0.91□□□□□ -2.26
RPL28P46779 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL28P46779 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.91□□□□□ -2.26
RPL28P46779 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.91□□□□□ -2.26
RPL28P46779 RNU1-92P-201ENST00000517017 135 ntBASIC0.91□□□□□ -2.26
RPL28P46779 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.91□□□□□ -2.26
RPL28P46779 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL28P46779 AC103987.3-201ENST00000582071 292 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AL136363.2-201ENST00000604173 851 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AC112187.2-201ENST00000604345 283 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AP001485.1-201ENST00000604799 199 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AL139022.2-201ENST00000606934 443 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AC063943.3-201ENST00000615562 356 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AL359547.2-201ENST00000615810 418 ntBASIC0.91□□□□□ -2.26
RPL28P46779 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.91□□□□□ -2.26
RPL28P46779 U6.42-201ENST00000618440 107 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AC130454.1-201ENST00000622948 401 ntBASIC0.91□□□□□ -2.26
RPL28P46779 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.91□□□□□ -2.26
RPL28P46779 AL138960.2-201ENST00000625145 535 ntBASIC0.91□□□□□ -2.26
RPL28P46779 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPL28P46779 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.91□□□□□ -2.26
RPL28P46779 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RPL28P46779 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.91□□□□□ -2.26
RPL28P46779 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
RPL28P46779 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
RPL28P46779 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RPL28P46779 MIR26B-201ENST00000362251 77 ntBASIC0.9□□□□□ -2.27
RPL28P46779 MIR302D-201ENST00000362275 68 ntBASIC0.9□□□□□ -2.27
RPL28P46779 RNU6-112P-201ENST00000363599 104 ntBASIC0.9□□□□□ -2.27
RPL28P46779 RNU6-271P-201ENST00000363858 105 ntBASIC0.9□□□□□ -2.27
RPL28P46779 RNY4P16-201ENST00000364768 94 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 AL031779.1-201ENST00000415663 330 ntBASIC0.9□□□□□ -2.27
RPL28P46779 RPL22P18-201ENST00000417197 377 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AL354695.1-201ENST00000427935 228 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 AL591806.2-201ENST00000433122 173 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.9□□□□□ -2.27
RPL28P46779 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.9□□□□□ -2.27
RPL28P46779 MTND1P12-201ENST00000455231 147 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.9□□□□□ -2.27
RPL28P46779 SNORD13-201ENST00000459299 104 ntBASIC0.9□□□□□ -2.27
RPL28P46779 RPL30P12-201ENST00000474666 353 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC108210.2-201ENST00000503681 201 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.9□□□□□ -2.27
RPL28P46779 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 MTATP6P15-201ENST00000527233 835 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC011979.2-201ENST00000527568 352 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL28P46779 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RPL28P46779 AC002400.1-201ENST00000569310 726 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC005668.1-201ENST00000571142 476 ntBASIC0.9□□□□□ -2.27
RPL28P46779 MIR548AC-201ENST00000585049 88 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC091135.1-201ENST00000585943 307 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AL158042.1-201ENST00000605338 460 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AC021755.4-201ENST00000616620 456 ntBASIC0.9□□□□□ -2.27
RPL28P46779 AL445523.1-201ENST00000451184 1362 ntBASIC0.9□□□□□ -2.27
RPL28P46779 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPL28P46779 LINC02555-201ENST00000563933 1951 ntBASIC0.89□□□□□ -2.27
RPL28P46779 ZNF29P-201ENST00000225587 168 ntBASIC0.89□□□□□ -2.27
RPL28P46779 SNORD56.1-201ENST00000362913 68 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RNU6-60P-201ENST00000364792 103 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RNU6-296P-201ENST00000384608 107 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RPS3AP36-201ENST00000398190 775 ntBASIC0.89□□□□□ -2.27
RPL28P46779 RNU2-41P-201ENST00000410991 178 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.89□□□□□ -2.27
RPL28P46779 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.89□□□□□ -2.27
RPL28P46779 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL28P46779 AC006366.1-201ENST00000422002 759 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AL358453.1-201ENST00000422522 250 ntBASIC0.89□□□□□ -2.27
RPL28P46779 MTND4P20-201ENST00000424125 869 ntBASIC0.89□□□□□ -2.27
RPL28P46779 MTND1P32-201ENST00000433043 938 ntBASIC0.89□□□□□ -2.27
RPL28P46779 UBE2V1P8-201ENST00000437166 265 ntBASIC0.89□□□□□ -2.27
RPL28P46779 AC007969.2-201ENST00000441891 191 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms