Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR621-201ENST00000384919 96 ntBASIC5.71□□□□□ -1.5
CD44P16070 MIR605-201ENST00000385078 83 ntBASIC5.71□□□□□ -1.5
CD44P16070 PTMAP5-201ENST00000393073 333 ntBASIC5.71□□□□□ -1.5
CD44P16070 SNORD65B-201ENST00000459126 73 ntBASIC5.71□□□□□ -1.5
CD44P16070 AC009127.1-201ENST00000467090 155 ntBASIC5.71□□□□□ -1.5
CD44P16070 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.71□□□□□ -1.5
CD44P16070 AC105137.1-201ENST00000484355 562 ntBASIC5.71□□□□□ -1.5
CD44P16070 MRPS17P9-201ENST00000511924 393 ntBASIC5.71□□□□□ -1.5
CD44P16070 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.71□□□□□ -1.5
CD44P16070 RNU6-581P-201ENST00000516214 105 ntBASIC5.71□□□□□ -1.5
CD44P16070 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.71□□□□□ -1.5
CD44P16070 MIR4716-201ENST00000579628 84 ntBASIC5.71□□□□□ -1.5
CD44P16070 MIR4512-201ENST00000583257 77 ntBASIC5.71□□□□□ -1.5
CD44P16070 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.71□□□□□ -1.5
CD44P16070 MIR1255B1-201ENST00000636325 63 ntBASIC5.71□□□□□ -1.5
CD44P16070 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CD44P16070 ANKRD20A9P-201ENST00000457997 2978 ntBASIC5.71□□□□□ -1.5
CD44P16070 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CD44P16070 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CD44P16070 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.7□□□□□ -1.5
CD44P16070 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CD44P16070 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CD44P16070 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CD44P16070 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CD44P16070 RNU6-117P-201ENST00000365415 107 ntBASIC5.7□□□□□ -1.5
CD44P16070 AL139095.1-201ENST00000404326 391 ntBASIC5.7□□□□□ -1.5
CD44P16070 RNU2-40P-201ENST00000410833 196 ntBASIC5.7□□□□□ -1.5
CD44P16070 AC104333.2-201ENST00000422630 192 ntBASIC5.7□□□□□ -1.5
CD44P16070 AL139148.1-201ENST00000427122 680 ntBASIC5.7□□□□□ -1.5
CD44P16070 RN7SL738P-201ENST00000470264 297 ntBASIC5.7□□□□□ -1.5
CD44P16070 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
CD44P16070 AC090255.1-201ENST00000495779 349 ntBASIC5.7□□□□□ -1.5
CD44P16070 AP006245.2-201ENST00000522004 300 ntBASIC5.7□□□□□ -1.5
CD44P16070 AC006349.1-201ENST00000555526 235 ntBASIC5.7□□□□□ -1.5
CD44P16070 RPSAP73-201ENST00000614820 330 ntBASIC5.7□□□□□ -1.5
CD44P16070 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CD44P16070 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.7□□□□□ -1.5
CD44P16070 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CD44P16070 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CD44P16070 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CD44P16070 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.7□□□□□ -1.5
CD44P16070 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CD44P16070 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.69□□□□□ -1.5
CD44P16070 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 RNA5SP183-201ENST00000362452 119 ntBASIC5.69□□□□□ -1.5
CD44P16070 RNU4-15P-201ENST00000362613 141 ntBASIC5.69□□□□□ -1.5
CD44P16070 SNORA73.1-201ENST00000363107 205 ntBASIC5.69□□□□□ -1.5
CD44P16070 MIR1182-201ENST00000408363 97 ntBASIC5.69□□□□□ -1.5
CD44P16070 BX323845.1-201ENST00000432417 179 ntBASIC5.69□□□□□ -1.5
CD44P16070 RPS29P10-201ENST00000439197 166 ntBASIC5.69□□□□□ -1.5
CD44P16070 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.69□□□□□ -1.5
CD44P16070 AC011602.1-201ENST00000546484 331 ntBASIC5.69□□□□□ -1.5
CD44P16070 MIR4305-201ENST00000583252 102 ntBASIC5.69□□□□□ -1.5
CD44P16070 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.69□□□□□ -1.5
CD44P16070 JPX_2.1-201ENST00000614161 69 ntBASIC5.69□□□□□ -1.5
CD44P16070 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CD44P16070 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD44P16070 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.68□□□□□ -1.5
CD44P16070 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CD44P16070 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
CD44P16070 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 RNU1-96P-201ENST00000364163 162 ntBASIC5.68□□□□□ -1.5
CD44P16070 RNA5SP242-201ENST00000364171 118 ntBASIC5.68□□□□□ -1.5
CD44P16070 RN7SKP15-201ENST00000364742 309 ntBASIC5.68□□□□□ -1.5
CD44P16070 SNORD58A-201ENST00000383875 65 ntBASIC5.68□□□□□ -1.5
CD44P16070 COX6B1P2-201ENST00000489624 230 ntBASIC5.68□□□□□ -1.5
CD44P16070 AC093259.1-201ENST00000509755 300 ntBASIC5.68□□□□□ -1.5
CD44P16070 RNU6-693P-201ENST00000516134 107 ntBASIC5.68□□□□□ -1.5
CD44P16070 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.68□□□□□ -1.5
CD44P16070 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CD44P16070 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD44P16070 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.67□□□□□ -1.5
CD44P16070 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CD44P16070 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
CD44P16070 RNU6-661P-201ENST00000362409 107 ntBASIC5.67□□□□□ -1.5
CD44P16070 RNU4-67P-201ENST00000364569 141 ntBASIC5.67□□□□□ -1.5
CD44P16070 AC007738.1-201ENST00000413892 348 ntBASIC5.67□□□□□ -1.5
CD44P16070 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.67□□□□□ -1.5
CD44P16070 RNA5SP362-201ENST00000516048 118 ntBASIC5.67□□□□□ -1.5
CD44P16070 RN7SKP282-201ENST00000516824 299 ntBASIC5.67□□□□□ -1.5
CD44P16070 AC068657.1-201ENST00000520807 306 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms