Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.4□□□□□ -1.54
MS4A1P11836 snoU13.1-201ENST00000459157 104 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 AC078817.1-201ENST00000492623 435 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 RNU5F-8P-201ENST00000515941 111 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 AC021231.3-201ENST00000558497 370 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 HSPE1P5-201ENST00000561489 272 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.4□□□□□ -1.54
MS4A1P11836 AC005828.6-201ENST00000606610 232 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.4□□□□□ -1.54
MS4A1P11836 SNORA43.4-201ENST00000629559 138 ntBASIC5.4□□□□□ -1.54
MS4A1P11836 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.4□□□□□ -1.55
MS4A1P11836 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
MS4A1P11836 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
MS4A1P11836 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
MS4A1P11836 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.4□□□□□ -1.55
MS4A1P11836 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A1P11836 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MS4A1P11836 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MS4A1P11836 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 RNA5SP447-201ENST00000363749 119 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 RNA5SP189-201ENST00000364920 115 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 RNU6-1175P-201ENST00000365200 107 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 SNORD20-201ENST00000384550 80 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 MIR329-1-201ENST00000385028 80 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 AC024067.1-201ENST00000426199 223 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 RPS29P19-201ENST00000479709 171 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 RNA5SP468-201ENST00000516782 93 ntBASIC5.39□□□□□ -1.55
MS4A1P11836 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.39□□□□□ -1.55
MS4A1P11836 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.39□□□□□ -1.55
MS4A1P11836 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A1P11836 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A1P11836 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.39□□□□□ -1.55
MS4A1P11836 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A1P11836 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A1P11836 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MS4A1P11836 HLFP1-201ENST00000402375 499 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 AL357139.1-201ENST00000407792 426 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 SNORA3C-201ENST00000408792 125 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 COX6B1P7-201ENST00000430845 235 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 RPL23AP46-201ENST00000438548 490 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.38□□□□□ -1.55
MS4A1P11836 RPL23AP3-201ENST00000453844 468 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.38□□□□□ -1.55
MS4A1P11836 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A1P11836 SNORA40.9-201ENST00000515895 93 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 RN7SKP122-201ENST00000515923 296 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.38□□□□□ -1.55
MS4A1P11836 AL391261.3-201ENST00000557194 520 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 KLKP1-201ENST00000595979 403 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 AC005176.2-201ENST00000596933 147 ntBASIC5.38□□□□□ -1.55
MS4A1P11836 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.38□□□□□ -1.55
MS4A1P11836 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A1P11836 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A1P11836 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A1P11836 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
MS4A1P11836 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
MS4A1P11836 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A1P11836 Y_RNA.331-201ENST00000365267 102 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 SNORA37-201ENST00000384504 129 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 MIR544A-201ENST00000384855 91 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 Y_RNA.595-201ENST00000410403 105 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 AC245028.1-201ENST00000423259 256 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 VDAC1P3-201ENST00000434069 851 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 AC009237.7-201ENST00000447357 229 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.37□□□□□ -1.55
MS4A1P11836 RN7SL691P-201ENST00000494487 301 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 VWA8P1-201ENST00000510889 176 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 RNA5SP49-201ENST00000516450 115 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 MIR5692C2-201ENST00000577959 77 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 AL356218.2-201ENST00000605264 187 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
MS4A1P11836 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.37□□□□□ -1.55
MS4A1P11836 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.37□□□□□ -1.55
MS4A1P11836 MIR3529-201ENST00000637713 78 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 AC073073.2-201ENST00000609827 2578 ntBASIC5.37□□□□□ -1.55
MS4A1P11836 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.37□□□□□ -1.55
MS4A1P11836 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A1P11836 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A1P11836 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A1P11836 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MS4A1P11836 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.36□□□□□ -1.55
MS4A1P11836 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
MS4A1P11836 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A1P11836 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A1P11836 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
MS4A1P11836 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A1P11836 RNA5SP197-201ENST00000363357 119 ntBASIC5.36□□□□□ -1.55
MS4A1P11836 Y_RNA.215-201ENST00000364204 112 ntBASIC5.36□□□□□ -1.55
MS4A1P11836 Y_RNA.217-201ENST00000364214 105 ntBASIC5.36□□□□□ -1.55
MS4A1P11836 RNU4-56P-201ENST00000364700 142 ntBASIC5.36□□□□□ -1.55
MS4A1P11836 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A1P11836 MIR186-201ENST00000384988 86 ntBASIC5.36□□□□□ -1.55
MS4A1P11836 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms