Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR3910-1-201ENST00000580936 111 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFAP04085 AL162713.1-201ENST00000604480 262 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFAP04085 AC099654.7-201ENST00000635788 2127 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 AL133412.1-201ENST00000380194 2992 ntBASIC4.22□□□□□ -1.73
PDGFAP04085 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFAP04085 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFAP04085 AC106871.1-201ENST00000568324 3102 ntBASIC4.21□□□□□ -1.73
PDGFAP04085 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFAP04085 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.73
PDGFAP04085 ZFRP1-201ENST00000457579 2970 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFAP04085 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFAP04085 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PDGFAP04085 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 RNU1-83P-201ENST00000363426 164 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AL359837.1-201ENST00000381357 287 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 RNU6-1310P-201ENST00000384153 107 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 RNU6-748P-201ENST00000384648 107 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 MIR23A-201ENST00000385245 73 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AL512633.1-201ENST00000399931 655 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 MIR208B-201ENST00000401172 77 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFAP04085 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 RPS15AP5-201ENST00000436276 388 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 RPL23AP93-201ENST00000440847 484 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 SNORD2.1-201ENST00000458762 69 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 SNORA84-201ENST00000459229 133 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AC105137.1-201ENST00000484355 562 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 RN7SL810P-201ENST00000493031 276 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFAP04085 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
PDGFAP04085 IPO5P1-202ENST00000600039 287 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 BPIFA4P-203ENST00000603168 689 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 MZT1P2-201ENST00000604387 248 ntBASIC4.21□□□□□ -1.74
PDGFAP04085 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PDGFAP04085 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PDGFAP04085 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFAP04085 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFAP04085 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFAP04085 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFAP04085 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFAP04085 RNU6-187P-201ENST00000384139 106 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 U3.26-201ENST00000391236 204 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNU6-493P-201ENST00000391321 108 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNA5SP317-201ENST00000410176 116 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNA5SP311-201ENST00000411290 116 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RPL23AP26-201ENST00000412728 464 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 AC245291.1-201ENST00000419501 328 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RAB28P5-201ENST00000427490 651 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFAP04085 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFAP04085 RN7SL98P-201ENST00000462271 300 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNU6-1278P-201ENST00000516130 107 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNA5SP315-201ENST00000516340 116 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RNA5SP312-201ENST00000517068 116 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 AC022559.1-201ENST00000520905 205 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 AP005660.1-201ENST00000522972 293 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 MIR3923-201ENST00000579521 83 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFAP04085 SNRPGP20-201ENST00000604477 205 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFAP04085 RNU6-91P-201ENST00000607774 107 ntBASIC4.2□□□□□ -1.74
PDGFAP04085 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFAP04085 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PDGFAP04085 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFAP04085 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFAP04085 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 Y_RNA.506-201ENST00000384494 102 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 RNU1-13P-201ENST00000384499 162 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 RNU6-125P-201ENST00000384505 107 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 RPS26P8-201ENST00000393490 348 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 Z98745.1-201ENST00000402553 494 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 Y_RNA.597-201ENST00000410463 100 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 RNU6-1140P-201ENST00000410517 106 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 EIF4HP2-201ENST00000424380 563 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 AP001324.2-201ENST00000461163 319 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 UQCRHP4-201ENST00000471686 272 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFAP04085 MIR2116-201ENST00000517221 80 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFAP04085 AC091152.3-201ENST00000604227 325 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 AC005520.5-201ENST00000613926 164 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 U6.106-201ENST00000636360 105 ntBASIC4.19□□□□□ -1.74
PDGFAP04085 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFAP04085 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFAP04085 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PDGFAP04085 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFAP04085 AC092593.1-201ENST00000515413 1815 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms