Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GABRG2-229ENST00000641017 3628 ntBASIC3.34□□□□□ -1.88
PROM1O43490 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PROM1O43490 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PROM1O43490 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PROM1O43490 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PROM1O43490 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
PROM1O43490 ZNF826P-207ENST00000622273 1910 ntBASIC3.33□□□□□ -1.88
PROM1O43490 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
PROM1O43490 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
PROM1O43490 Y_RNA.47-201ENST00000362697 108 ntBASIC3.33□□□□□ -1.88
PROM1O43490 Y_RNA.176-201ENST00000363815 109 ntBASIC3.33□□□□□ -1.88
PROM1O43490 Y_RNA.424-201ENST00000384063 103 ntBASIC3.33□□□□□ -1.88
PROM1O43490 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PROM1O43490 Y_RNA.645-201ENST00000391229 102 ntBASIC3.33□□□□□ -1.88
PROM1O43490 Z82210.1-201ENST00000440037 231 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AL078601.1-201ENST00000444542 271 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AL353752.1-201ENST00000454946 260 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
PROM1O43490 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.33□□□□□ -1.88
PROM1O43490 U8.21-201ENST00000459536 136 ntBASIC3.33□□□□□ -1.88
PROM1O43490 RPL23AP45-201ENST00000476406 468 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AK3P2-201ENST00000507976 429 ntBASIC3.33□□□□□ -1.88
PROM1O43490 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
PROM1O43490 RNU6-635P-201ENST00000516651 102 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AP002404.1-201ENST00000532005 451 ntBASIC3.33□□□□□ -1.88
PROM1O43490 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PROM1O43490 AC103996.1-201ENST00000555468 102 ntBASIC3.33□□□□□ -1.88
PROM1O43490 SUB1P3-201ENST00000564581 315 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PROM1O43490 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.33□□□□□ -1.88
PROM1O43490 AP000787.2-201ENST00000604432 568 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AC004852.3-201ENST00000614131 326 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AL161629.2-201ENST00000615347 275 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AC099506.2-201ENST00000623074 221 ntBASIC3.33□□□□□ -1.88
PROM1O43490 AL606534.2-204ENST00000635008 178 ntBASIC3.33□□□□□ -1.88
PROM1O43490 U6.99-201ENST00000637524 83 ntBASIC3.33□□□□□ -1.88
PROM1O43490 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
PROM1O43490 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PROM1O43490 RNY1P16-201ENST00000363063 111 ntBASIC3.32□□□□□ -1.88
PROM1O43490 RNU6-238P-201ENST00000363313 106 ntBASIC3.32□□□□□ -1.88
PROM1O43490 RNU6-596P-201ENST00000365395 98 ntBASIC3.32□□□□□ -1.88
PROM1O43490 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
PROM1O43490 Y_RNA.401-201ENST00000383965 117 ntBASIC3.32□□□□□ -1.88
PROM1O43490 RNU6-26P-201ENST00000383985 107 ntBASIC3.32□□□□□ -1.88
PROM1O43490 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PROM1O43490 SNORA40C-201ENST00000391285 128 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
PROM1O43490 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
PROM1O43490 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC092573.2-201ENST00000434546 243 ntBASIC3.32□□□□□ -1.88
PROM1O43490 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.32□□□□□ -1.88
PROM1O43490 snoU109.2-201ENST00000459316 135 ntBASIC3.32□□□□□ -1.88
PROM1O43490 RNU4-77P-201ENST00000516692 156 ntBASIC3.32□□□□□ -1.88
PROM1O43490 Y_RNA.721-201ENST00000517207 102 ntBASIC3.32□□□□□ -1.88
PROM1O43490 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
PROM1O43490 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
PROM1O43490 AC113195.1-201ENST00000579952 141 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.32□□□□□ -1.88
PROM1O43490 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
PROM1O43490 7SK.7-201ENST00000603504 247 ntBASIC3.32□□□□□ -1.88
PROM1O43490 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
PROM1O43490 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
PROM1O43490 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
PROM1O43490 AC138627.2-201ENST00000624202 601 ntBASIC3.32□□□□□ -1.88
PROM1O43490 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.32□□□□□ -1.88
PROM1O43490 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.32□□□□□ -1.88
PROM1O43490 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PROM1O43490 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PROM1O43490 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
PROM1O43490 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 AL359693.1-201ENST00000614959 2407 ntBASIC3.31□□□□□ -1.88
PROM1O43490 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 U8.8-201ENST00000365399 135 ntBASIC3.31□□□□□ -1.88
PROM1O43490 Y_RNA.452-201ENST00000384202 108 ntBASIC3.31□□□□□ -1.88
PROM1O43490 RNU6-166P-201ENST00000384371 107 ntBASIC3.31□□□□□ -1.88
PROM1O43490 RNU6-505P-201ENST00000384427 107 ntBASIC3.31□□□□□ -1.88
PROM1O43490 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
PROM1O43490 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
PROM1O43490 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
PROM1O43490 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.31□□□□□ -1.88
PROM1O43490 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.31□□□□□ -1.88
PROM1O43490 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
PROM1O43490 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PROM1O43490 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.31□□□□□ -1.88
PROM1O43490 AC006483.1-201ENST00000487308 313 ntBASIC3.31□□□□□ -1.88
PROM1O43490 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
PROM1O43490 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
PROM1O43490 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
PROM1O43490 CPDP1-201ENST00000579660 283 ntBASIC3.31□□□□□ -1.88
PROM1O43490 AC136601.2-201ENST00000604356 474 ntBASIC3.31□□□□□ -1.88
PROM1O43490 SNORD58B-201ENST00000607313 66 ntBASIC3.31□□□□□ -1.88
PROM1O43490 HMGB1P24-202ENST00000615653 685 ntBASIC3.31□□□□□ -1.88
PROM1O43490 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.31□□□□□ -1.88
PROM1O43490 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.31□□□□□ -1.88
PROM1O43490 AC138305.3-201ENST00000624988 240 ntBASIC3.31□□□□□ -1.88
PROM1O43490 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms