Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNU6-827P-201ENST00000365553 106 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 RNA5SP120-201ENST00000410900 112 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 RNU2-25P-201ENST00000411041 191 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC005326.1-201ENST00000429197 123 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 MTND3P9-201ENST00000429526 346 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 RPS29P27-201ENST00000463711 170 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 RNU6-397P-201ENST00000516226 104 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.713-201ENST00000517013 96 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 AC104581.2-201ENST00000572227 430 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 OR4G2P-202ENST00000641004 1759 ntBASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BCAS3Q9H6U6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 Z75746.1-201ENST00000440243 2080 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.84-201ENST00000363011 104 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RNU6-629P-201ENST00000384061 103 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.458-201ENST00000384240 102 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.477-201ENST00000384352 108 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 MIR521-1-201ENST00000384902 87 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 SNORD115-46-201ENST00000390982 71 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 SNORA40C-201ENST00000391285 128 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RPS29P13-201ENST00000402041 169 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 MIR1290-201ENST00000408735 78 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RNA5SP494-201ENST00000410653 129 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RNU2-71P-201ENST00000411395 189 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 SDAD1P3-201ENST00000427380 333 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 MTND2P29-201ENST00000438595 412 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AL049874.1-201ENST00000489560 388 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RNU2-27P-201ENST00000516185 142 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RNU6-182P-201ENST00000516970 105 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 MIR2355-201ENST00000517199 87 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AL590705.4-201ENST00000532209 134 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 RRN3P3-201ENST00000549207 578 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AL442163.3-201ENST00000554110 156 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 AL161629.2-201ENST00000615347 275 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 MIR6715B-201ENST00000637172 77 ntBASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
BCAS3Q9H6U6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 SNORD81.1-201ENST00000363064 77 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.180-201ENST00000363867 113 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 U3.39-201ENST00000408569 239 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RPL21P38-201ENST00000418090 167 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 BX679664.1-201ENST00000434429 253 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RPS29P2-201ENST00000479278 136 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 GZMAP1-201ENST00000503054 631 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RNU6-579P-201ENST00000516879 102 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RNU6-612P-201ENST00000516909 102 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 RNU6-570P-201ENST00000517051 105 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AC005476.1-201ENST00000554427 397 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 FTX_2.1-201ENST00000618816 94 ntBASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BCAS3Q9H6U6 AC008725.1-201ENST00000605123 2263 ntBASIC3.9□□□□□ -1.79
BCAS3Q9H6U6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BCAS3Q9H6U6 U3.13-201ENST00000364804 214 ntBASIC3.9□□□□□ -1.79
BCAS3Q9H6U6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.9□□□□□ -1.79
BCAS3Q9H6U6 RNY3P4-201ENST00000384428 101 ntBASIC3.9□□□□□ -1.79
BCAS3Q9H6U6 MRPL35P1-201ENST00000404272 572 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms