Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC006006.1-201ENST00000603082 144 ntBASIC3.98□□□□□ -1.77
SHDQ96IW2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.98□□□□□ -1.77
SHDQ96IW2 AC015813.4-201ENST00000610469 179 ntBASIC3.98□□□□□ -1.77
SHDQ96IW2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHDQ96IW2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHDQ96IW2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SHDQ96IW2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
SHDQ96IW2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
SHDQ96IW2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHDQ96IW2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.98□□□□□ -1.77
SHDQ96IW2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
SHDQ96IW2 AC233263.6-201ENST00000631132 1963 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 SNORD32A-201ENST00000364805 84 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RNU6-702P-201ENST00000364982 107 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RNU6-713P-201ENST00000384761 107 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RNVU1-14-201ENST00000384770 164 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SHDQ96IW2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 PTGES3P4-201ENST00000426243 356 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RPL21P40-201ENST00000428586 483 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 AC009296.1-201ENST00000443146 155 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 OSTCP8-201ENST00000445117 448 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.97□□□□□ -1.77
SHDQ96IW2 CEACAMP4-201ENST00000457676 421 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 AC010655.3-201ENST00000478818 450 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RPL23AP75-201ENST00000491601 451 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 SNORA31.1-201ENST00000515993 133 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 SNORA31.5-201ENST00000516190 133 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RN7SKP272-201ENST00000516988 232 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.97□□□□□ -1.77
SHDQ96IW2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 HSPE1P4-201ENST00000550617 308 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RMST_6.1-201ENST00000611980 203 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 AC091903.1-201ENST00000624322 454 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.97□□□□□ -1.77
SHDQ96IW2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.97□□□□□ -1.77
SHDQ96IW2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.97□□□□□ -1.77
SHDQ96IW2 AC010680.1-201ENST00000590024 3590 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.97□□□□□ -1.77
SHDQ96IW2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHDQ96IW2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SHDQ96IW2 UBE3AP2-201ENST00000429033 2259 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 AC011266.1-201ENST00000624119 3569 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.96□□□□□ -1.78
SHDQ96IW2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 RNU1-15P-201ENST00000353977 144 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 SNORD115-32-201ENST00000364079 82 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 SET-203ENST00000372688 801 ntTSL 2 BASIC3.96□□□□□ -1.78
SHDQ96IW2 RNU6-19P-201ENST00000384718 107 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 Y_RNA.618-201ENST00000410949 107 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 SNORD105B-201ENST00000458770 79 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.96□□□□□ -1.78
SHDQ96IW2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.96□□□□□ -1.78
SHDQ96IW2 ANXA2P1-201ENST00000505539 926 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 MRPS36P4-201ENST00000534436 298 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SHDQ96IW2 AC011471.1-201ENST00000585766 187 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 AL355877.2-201ENST00000603670 358 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.96□□□□□ -1.78
SHDQ96IW2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.96□□□□□ -1.78
SHDQ96IW2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SHDQ96IW2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SHDQ96IW2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHDQ96IW2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHDQ96IW2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHDQ96IW2 Z75746.1-201ENST00000440243 2080 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
SHDQ96IW2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.95□□□□□ -1.78
SHDQ96IW2 RNU1-76P-201ENST00000362903 159 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 Y_RNA.276-201ENST00000364732 109 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 Y_RNA.358-201ENST00000365491 99 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.95□□□□□ -1.78
SHDQ96IW2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 RNU6-748P-201ENST00000384648 107 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 GPM6BP3-201ENST00000442797 145 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 SNORA59A-201ENST00000459326 152 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.95□□□□□ -1.78
SHDQ96IW2 RNU6-1143P-201ENST00000516125 104 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 SNORA70.14-201ENST00000516205 110 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 SNORA40.15-201ENST00000516884 107 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHDQ96IW2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.95□□□□□ -1.78
SHDQ96IW2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.95□□□□□ -1.78
SHDQ96IW2 AC006557.5-201ENST00000603126 811 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 RPL23AP88-201ENST00000605759 454 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.95□□□□□ -1.78
SHDQ96IW2 AC010205.1-201ENST00000616668 449 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms