Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AC078809.1-201ENST00000427601 140 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 snoU13.6-201ENST00000458785 104 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 RN7SL98P-201ENST00000462271 300 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 SCARNA13-201ENST00000516672 275 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AC021231.3-201ENST00000558497 370 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AL451007.1-201ENST00000595491 289 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AL357075.2-201ENST00000614906 189 ntBASIC4.8□□□□□ -1.64
RNF135Q8IUD6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF135Q8IUD6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 MIR372-201ENST00000362225 67 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 SNORA71.3-201ENST00000362582 128 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 RNU6-1325P-201ENST00000364905 105 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 RNU6-213P-201ENST00000384051 104 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 Z98745.1-201ENST00000402553 494 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 Y_RNA.595-201ENST00000410403 105 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AC010095.1-201ENST00000443543 144 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AC010409.1-201ENST00000487382 476 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 RPS27AP10-201ENST00000496103 208 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 YWHAEP4-201ENST00000505390 198 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 RNA5SP54-201ENST00000516951 92 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 CKS1BP7-201ENST00000522230 235 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AL359198.2-201ENST00000611836 194 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AC010999.1-201ENST00000611856 324 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 AC007496.3-201ENST00000624987 3443 ntBASIC4.79□□□□□ -1.64
RNF135Q8IUD6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF135Q8IUD6 MAPK10-349ENST00000641767 3661 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF135Q8IUD6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RNF135Q8IUD6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF135Q8IUD6 SNORA31-201ENST00000362607 130 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 RNU5F-3P-201ENST00000363767 117 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 RNU6-873P-201ENST00000363833 107 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 MIR569-201ENST00000385228 96 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AL357139.1-201ENST00000407792 426 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 CYCSP19-201ENST00000411715 316 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC138623.1-201ENST00000418060 216 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC024067.1-201ENST00000426199 223 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC244670.1-201ENST00000436879 112 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC012308.1-201ENST00000451232 178 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC005042.3-201ENST00000453230 174 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AP000705.1-201ENST00000454567 350 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC091179.1-201ENST00000461606 579 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AL591473.1-201ENST00000464297 313 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC233702.2-202ENST00000562547 291 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 BPIFA4P-203ENST00000603168 689 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AC022441.3-201ENST00000605737 136 ntBASIC4.78□□□□□ -1.64
RNF135Q8IUD6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF135Q8IUD6 AP001273.1-201ENST00000624493 3152 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 RNU6-1298P-201ENST00000362456 101 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.127-201ENST00000363386 109 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 RNU6-818P-201ENST00000364837 108 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.571-201ENST00000384753 98 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 RPS26P42-201ENST00000413485 326 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 RN7SKP46-201ENST00000515942 234 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 RNU6-1333P-201ENST00000516162 93 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AC009163.5-201ENST00000575421 637 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AC024614.2-201ENST00000577584 372 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 MIR5692C2-201ENST00000577959 77 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AC048347.1-201ENST00000624621 427 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF135Q8IUD6 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
RNF135Q8IUD6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RNF135Q8IUD6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF135Q8IUD6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNF135Q8IUD6 MIR383-201ENST00000362257 73 ntBASIC4.76□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.43-201ENST00000362670 111 ntBASIC4.76□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.217-201ENST00000364214 105 ntBASIC4.76□□□□□ -1.65
RNF135Q8IUD6 Y_RNA.218-201ENST00000364218 104 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms