Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 TRAV32-201ENST00000553993 340 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 MIR3609-201ENST00000582661 80 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 AC006504.6-201ENST00000590142 199 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 MIR7153-201ENST00000637758 57 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 AL353743.1-202ENST00000431724 1695 ntBASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf139Q6ZV77 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.65□□□□□ -1.98
C9orf139Q6ZV77 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf139Q6ZV77 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
C9orf139Q6ZV77 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.28-201ENST00000362554 111 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 SNORA14A-201ENST00000364773 135 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.463-201ENST00000384271 102 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNU1-101P-201ENST00000391171 127 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNA5SP38-201ENST00000410750 119 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNU6-325P-201ENST00000411132 105 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC126124.2-201ENST00000413542 321 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC243428.1-201ENST00000421099 264 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC018865.2-201ENST00000423631 129 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 USMG5P1-201ENST00000425964 177 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC098614.2-201ENST00000426040 255 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC093151.1-201ENST00000427711 313 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AL133396.1-201ENST00000432048 687 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AL078601.1-201ENST00000444542 271 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 PCMTD1P1-201ENST00000455560 355 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 PTP4A1P4-201ENST00000512479 322 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNU6-976P-201ENST00000516086 111 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 SCARNA16.2-201ENST00000516520 172 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1282P-201ENST00000516735 96 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 RNU6-703P-201ENST00000516946 107 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AL162730.1-201ENST00000605734 292 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AL355802.3-201ENST00000607571 545 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 FTX_3.1-201ENST00000610451 147 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 MAPK10-322ENST00000641485 4530 ntBASIC2.65□□□□□ -1.99
C9orf139Q6ZV77 AC092435.3-201ENST00000565538 3654 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC093908.1-201ENST00000623125 8092 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.2-201ENST00000362330 96 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.111-201ENST00000363248 100 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.148-201ENST00000363557 117 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 Z98749.2-208ENST00000381646 500 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.422-201ENST00000384054 114 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 EI24P2-201ENST00000397776 1076 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 UBA52P6-201ENST00000399822 382 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL035666.1-201ENST00000446195 348 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL031274.1-201ENST00000450334 232 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 snoU109.2-201ENST00000459316 135 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC006445.1-201ENST00000491925 405 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC010265.1-201ENST00000513509 211 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 RNU6-470P-201ENST00000515954 104 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 RN7SKP295-201ENST00000517264 153 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 DNAJC8P1-201ENST00000554535 372 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 CYCSP39-201ENST00000565821 309 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 CPDP1-201ENST00000579660 283 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL645944.1-201ENST00000603857 493 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL591516.1-201ENST00000611326 274 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC011890.2-201ENST00000613393 294 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC027309.3-201ENST00000623419 351 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 U2.21-201ENST00000637295 81 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 AC093010.3-201ENST00000570269 15214 ntBASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf139Q6ZV77 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf139Q6ZV77 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms