Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AP000560.1-201ENST00000624150 1937 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 MIR190B-201ENST00000401119 79 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 HLFP1-201ENST00000402375 499 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 MIR548H3-201ENST00000408771 118 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AC009237.8-201ENST00000445492 379 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AC013470.1-201ENST00000453438 462 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 HMGB3P17-201ENST00000504195 649 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 SCARNA4-202ENST00000625402 129 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 SCARNA15.3-201ENST00000626315 122 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 SCARNA4.1-201ENST00000628597 123 ntBASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AL133383.2-201ENST00000622958 2336 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.405-201ENST00000383979 100 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.451-201ENST00000384200 100 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.524-201ENST00000384564 100 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.561-201ENST00000384694 100 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 SNORA12.2-201ENST00000391040 156 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 RNU2-64P-201ENST00000411315 191 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Z82210.1-201ENST00000440037 231 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AL513124.1-201ENST00000450410 614 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AP001486.1-201ENST00000463339 476 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC025465.3-201ENST00000510570 311 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 MTND1P19-201ENST00000511780 315 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC023141.12-201ENST00000512399 199 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 RNU7-175P-201ENST00000515915 61 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.713-201ENST00000517013 96 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 MIR4782-201ENST00000577987 79 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 MIR3124-201ENST00000582636 67 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 YPEL5P2-201ENST00000605553 359 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC005046.1-201ENST00000608515 625 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 MIR8057-201ENST00000620957 69 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC090617.7-201ENST00000623952 126 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 AC007785.2-201ENST00000598627 1916 ntBASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
PRPF40BQ6NWY9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-78P-201ENST00000362897 107 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.105-201ENST00000363182 111 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 SNORD27-201ENST00000363981 72 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-336P-201ENST00000364891 107 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU1-89P-201ENST00000384592 164 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 MIR607-201ENST00000385241 96 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU2-25P-201ENST00000411041 191 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-130P-201ENST00000411112 103 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC017083.1-201ENST00000428093 483 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 SNRPEP9-201ENST00000436794 238 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 SUMO1P3-201ENST00000439961 304 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC067942.3-201ENST00000512025 362 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RNU2-27P-201ENST00000516185 142 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 SNORA70.18-201ENST00000516696 98 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC093023.1-201ENST00000547375 507 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC012433.1-201ENST00000588916 398 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 RPL23AP78-201ENST00000599928 470 ntBASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.55□□□□□ -1.68
PRPF40BQ6NWY9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 AC006504.1-201ENST00000562493 3666 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 Y_RNA.117-201ENST00000363294 101 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 RNA5SP189-201ENST00000364920 115 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 HMGN2P8-201ENST00000391458 268 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 MIR548I3-201ENST00000408378 149 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 MIR548I1-201ENST00000408810 149 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 MTND5P15-201ENST00000434246 349 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 RPS29P27-201ENST00000463711 170 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 RPL31P13-201ENST00000484151 370 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 RPL23AP49-201ENST00000492925 468 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 SNORA31.18-201ENST00000517043 134 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 CASP1P1-201ENST00000526345 212 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 AL442163.3-201ENST00000554110 156 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 AC104581.2-201ENST00000572227 430 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 U4.7-201ENST00000638126 106 ntBASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF40BQ6NWY9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms