Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 SMG1P4-204ENST00000523028 4131 ntBASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNFT1Q5M7Z0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 TLK1P1-201ENST00000456760 2440 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-799P-201ENST00000363567 107 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 SNORA26.3-201ENST00000391119 136 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-855P-201ENST00000410395 104 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC012306.1-201ENST00000423267 114 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AL356867.1-201ENST00000429623 299 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC006445.2-201ENST00000510061 472 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AL110118.1-201ENST00000553543 400 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC093249.4-201ENST00000564755 259 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 CYCSP39-201ENST00000565821 309 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC131055.1-201ENST00000584626 316 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC019159.1-201ENST00000605094 187 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 MTND5P18-201ENST00000445624 1801 ntBASIC4.34□□□□□ -1.71
RNFT1Q5M7Z0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 AC026951.1-201ENST00000559530 2459 ntBASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNFT1Q5M7Z0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 MAPK10-263ENST00000641052 4307 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 Y_RNA.85-201ENST00000363014 111 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SNORD113.2-201ENST00000364166 89 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SNORD18B-201ENST00000365659 72 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-1336P-201ENST00000383886 109 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SNORA51.5-201ENST00000384126 131 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 MIR450A2-201ENST00000385022 100 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RNU1-82P-201ENST00000390851 165 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 MIR1302-5-201ENST00000408164 150 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-592P-201ENST00000411333 103 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 CYP4F29P-201ENST00000420685 446 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RPL23AP1-201ENST00000428990 471 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 AC009237.8-201ENST00000445492 379 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 Y_RNA.690-201ENST00000516603 95 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 MIR4697-201ENST00000582977 78 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 MIR4715-201ENST00000584117 79 ntBASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNFT1Q5M7Z0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-727P-201ENST00000363592 107 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-173P-201ENST00000364215 104 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-978P-201ENST00000364371 103 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 MIR488-201ENST00000365739 83 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 SNORA18.3-201ENST00000384122 132 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-813P-201ENST00000384691 107 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 MIR29B2-201ENST00000385055 81 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 MIR320B2-201ENST00000408479 138 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RPL18P10-201ENST00000425606 538 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RN7SL517P-201ENST00000462240 305 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 SNRPGP7-201ENST00000469016 106 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-1146P-201ENST00000516282 102 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNA5SP291-201ENST00000517222 105 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 RNU6-709P-201ENST00000517257 104 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AL359198.2-201ENST00000611836 194 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AC009831.4-201ENST00000620744 325 ntBASIC4.32□□□□□ -1.72
RNFT1Q5M7Z0 AP000542.2-201ENST00000623199 6179 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms