Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MAPK10-362ENST00000641864 4484 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.81□□□□□ -1.8
VAMP1P23763 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP1P23763 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP1P23763 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP1P23763 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 MIR423-201ENST00000362201 94 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 Y_RNA.133-201ENST00000363428 110 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 SNORA18.2-201ENST00000383865 132 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 SNORA12-201ENST00000391162 147 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP1P23763 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 MIR1294-201ENST00000408503 142 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 MTCYBP9-201ENST00000431021 303 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 RPL21P2-201ENST00000440049 481 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC010095.1-201ENST00000443543 144 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 UQCRBP2-201ENST00000447827 297 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 RBMY2UP-201ENST00000453474 324 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC006539.3-201ENST00000454258 129 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC091179.1-201ENST00000461606 579 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 COPS8P2-201ENST00000473228 627 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC010469.2-201ENST00000496412 480 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 MTCO2P24-201ENST00000515611 426 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 RAB9BP1-201ENST00000519581 626 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 CYCSP23-201ENST00000519781 313 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.8□□□□□ -1.8
VAMP1P23763 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.8□□□□□ -1.8
VAMP1P23763 AC136624.4-201ENST00000573044 370 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC006130.2-201ENST00000586202 326 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC125232.2-201ENST00000592457 143 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 RAC1P9-201ENST00000604990 392 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 Mico1.1-201ENST00000611698 204 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 TCL6_2.1-201ENST00000615162 119 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 AC130454.1-201ENST00000622948 401 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 U6.104-201ENST00000637979 90 ntBASIC3.8□□□□□ -1.8
VAMP1P23763 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP1P23763 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP1P23763 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP1P23763 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAMP1P23763 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAMP1P23763 RNA5SP183-201ENST00000362452 119 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 RNA5SP240-201ENST00000365355 128 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 RNU6-463P-201ENST00000384340 107 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AL033519.2-201ENST00000403958 392 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 RNU6-1328P-201ENST00000410938 106 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 TMSB10P2-201ENST00000416049 131 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.79□□□□□ -1.8
VAMP1P23763 AC004386.2-201ENST00000441858 148 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP1P23763 AL161636.2-201ENST00000445179 927 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 HMGN1P2-201ENST00000445197 310 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC011276.1-201ENST00000469688 323 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 OR2AO1P-201ENST00000476497 403 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC006517.1-201ENST00000480485 328 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 RNU5F-4P-201ENST00000516581 114 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 RNU6-897P-201ENST00000517135 105 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP1P23763 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.79□□□□□ -1.8
VAMP1P23763 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP1P23763 MIR4691-201ENST00000583764 85 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC010201.1-201ENST00000605051 540 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC011476.5-201ENST00000615594 130 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 AC240442.1-201ENST00000616055 283 ntBASIC3.79□□□□□ -1.8
VAMP1P23763 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAMP1P23763 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.79□□□□□ -1.8
VAMP1P23763 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
VAMP1P23763 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP1P23763 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP1P23763 MTND5P35-201ENST00000557537 1720 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.78□□□□□ -1.8
VAMP1P23763 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP1P23763 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VAMP1P23763 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 RNU6-727P-201ENST00000363592 107 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 Y_RNA.458-201ENST00000384240 102 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 RNU6-318P-201ENST00000384283 103 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 RNU6-1109P-201ENST00000391187 107 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 U3.30-201ENST00000391308 210 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP1P23763 MIR548F4-201ENST00000408515 105 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AL645608.4-201ENST00000423619 154 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.78□□□□□ -1.8
VAMP1P23763 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.78□□□□□ -1.8
VAMP1P23763 DYNLT3P2-201ENST00000442517 295 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms