Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.92□□□□□ -2.1
P04436 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
P04436 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
P04436 ELL2P3-201ENST00000457883 1602 ntBASIC1.91□□□□□ -2.1
P04436 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
P04436 HAUS6P2-201ENST00000433254 2404 ntBASIC1.91□□□□□ -2.1
P04436 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
P04436 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
P04436 RNU6-1097P-201ENST00000363586 107 ntBASIC1.91□□□□□ -2.1
P04436 Y_RNA.159-201ENST00000363674 87 ntBASIC1.91□□□□□ -2.1
P04436 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
P04436 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
P04436 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
P04436 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.91□□□□□ -2.1
P04436 RNU6-1140P-201ENST00000410517 106 ntBASIC1.91□□□□□ -2.1
P04436 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
P04436 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
P04436 AL669831.1-202ENST00000428504 417 ntBASIC1.91□□□□□ -2.1
P04436 MTCO2P11-201ENST00000431069 680 ntBASIC1.91□□□□□ -2.1
P04436 MTCO2P16-201ENST00000436962 677 ntBASIC1.91□□□□□ -2.1
P04436 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.91□□□□□ -2.1
P04436 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
P04436 GTF2IP13-201ENST00000438487 386 ntBASIC1.91□□□□□ -2.1
P04436 AC132479.1-201ENST00000449160 144 ntBASIC1.91□□□□□ -2.1
P04436 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.91□□□□□ -2.1
P04436 AL118520.1-201ENST00000450770 291 ntBASIC1.91□□□□□ -2.1
P04436 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.91□□□□□ -2.1
P04436 C1DP4-201ENST00000455429 424 ntBASIC1.91□□□□□ -2.1
P04436 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
P04436 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
P04436 AC140059.1-201ENST00000489238 361 ntBASIC1.91□□□□□ -2.1
P04436 CKS1BP2-201ENST00000497342 240 ntBASIC1.91□□□□□ -2.1
P04436 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.91□□□□□ -2.1
P04436 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.91□□□□□ -2.1
P04436 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
P04436 AC117532.1-201ENST00000514638 323 ntBASIC1.91□□□□□ -2.1
P04436 Y_RNA.687-201ENST00000516558 91 ntBASIC1.91□□□□□ -2.1
P04436 RNA5SP137-201ENST00000516833 135 ntBASIC1.91□□□□□ -2.1
P04436 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
P04436 AC109329.1-201ENST00000518744 317 ntBASIC1.91□□□□□ -2.1
P04436 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.91□□□□□ -2.1
P04436 AL356057.1-201ENST00000533798 831 ntBASIC1.91□□□□□ -2.1
P04436 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.91□□□□□ -2.1
P04436 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.91□□□□□ -2.1
P04436 RSL24D1P11-201ENST00000591045 491 ntBASIC1.91□□□□□ -2.1
P04436 AL713866.2-201ENST00000603579 219 ntBASIC1.91□□□□□ -2.1
P04436 Z84480.1-201ENST00000605131 311 ntBASIC1.91□□□□□ -2.1
P04436 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
P04436 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
P04436 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
P04436 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
P04436 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
P04436 AC005336.3-201ENST00000623833 2679 ntBASIC1.91□□□□□ -2.1
P04436 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
P04436 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
P04436 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
P04436 Y_RNA.77-201ENST00000362962 107 ntBASIC1.9□□□□□ -2.11
P04436 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
P04436 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
P04436 RNU6-387P-201ENST00000411331 105 ntBASIC1.9□□□□□ -2.11
P04436 RNA5SP111-201ENST00000411386 101 ntBASIC1.9□□□□□ -2.11
P04436 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.9□□□□□ -2.11
P04436 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.9□□□□□ -2.11
P04436 MTND1P27-201ENST00000451117 902 ntBASIC1.9□□□□□ -2.11
P04436 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.9□□□□□ -2.11
P04436 TPT1P7-201ENST00000458300 517 ntBASIC1.9□□□□□ -2.11
P04436 RPS29P15-201ENST00000458329 171 ntBASIC1.9□□□□□ -2.11
P04436 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
P04436 MED28P2-201ENST00000475771 317 ntBASIC1.9□□□□□ -2.11
P04436 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.9□□□□□ -2.11
P04436 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
P04436 MTCO2P4-201ENST00000517968 247 ntBASIC1.9□□□□□ -2.11
P04436 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.9□□□□□ -2.11
P04436 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.9□□□□□ -2.11
P04436 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.9□□□□□ -2.11
P04436 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.9□□□□□ -2.11
P04436 MIR3126-201ENST00000577443 74 ntBASIC1.9□□□□□ -2.11
P04436 AC104984.5-201ENST00000586878 94 ntBASIC1.9□□□□□ -2.11
P04436 AC010620.1-201ENST00000601088 1102 ntBASIC1.9□□□□□ -2.11
P04436 AC025449.1-201ENST00000603896 529 ntBASIC1.9□□□□□ -2.11
P04436 AL121917.1-203ENST00000605534 577 ntBASIC1.9□□□□□ -2.11
P04436 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.9□□□□□ -2.11
P04436 RMST_4.1-201ENST00000616886 107 ntBASIC1.9□□□□□ -2.11
P04436 AC008121.3-201ENST00000618726 433 ntBASIC1.9□□□□□ -2.11
P04436 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
P04436 MIR3529-201ENST00000637713 78 ntBASIC1.9□□□□□ -2.11
P04436 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
P04436 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.9□□□□□ -2.11
P04436 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.9□□□□□ -2.11
P04436 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
P04436 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
P04436 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
P04436 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
P04436 RBBP8P1-201ENST00000449447 1844 ntBASIC1.89□□□□□ -2.11
P04436 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
P04436 RNU6-1010P-201ENST00000362757 107 ntBASIC1.89□□□□□ -2.11
P04436 RNU6-487P-201ENST00000365430 104 ntBASIC1.89□□□□□ -2.11
P04436 RNU6-116P-201ENST00000384042 109 ntBASIC1.89□□□□□ -2.11
P04436 RNU6-1029P-201ENST00000384109 107 ntBASIC1.89□□□□□ -2.11
P04436 RNU6-843P-201ENST00000384454 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms