Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR521-1-201ENST00000384902 87 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 SAR1AP2-201ENST00000392696 594 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 RPL21P1-201ENST00000399532 476 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 U3.42-201ENST00000408746 214 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.38□□□□□ -1.71
GRIN3BO60391 AC098614.2-201ENST00000426040 255 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 HIGD1AP2-201ENST00000446367 280 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AC092798.1-201ENST00000458542 409 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.38□□□□□ -1.71
GRIN3BO60391 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.38□□□□□ -1.71
GRIN3BO60391 RNU6-572P-201ENST00000516724 80 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.38□□□□□ -1.71
GRIN3BO60391 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.38□□□□□ -1.71
GRIN3BO60391 AC006600.1-201ENST00000572529 153 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AL713866.2-201ENST00000603579 219 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 MIR8062-201ENST00000621515 85 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AC099506.2-201ENST00000623074 221 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AC027309.3-201ENST00000623419 351 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 AC091903.1-201ENST00000624322 454 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.38□□□□□ -1.71
GRIN3BO60391 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GRIN3BO60391 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.38□□□□□ -1.71
GRIN3BO60391 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.38□□□□□ -1.71
GRIN3BO60391 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
GRIN3BO60391 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GRIN3BO60391 SNORD74.4-201ENST00000364129 80 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC007098.1-201ENST00000420122 367 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC092047.1-201ENST00000424997 240 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC007560.1-201ENST00000426912 237 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.37□□□□□ -1.71
GRIN3BO60391 MTCO3P8-201ENST00000453691 755 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.37□□□□□ -1.71
GRIN3BO60391 AC010469.1-201ENST00000463864 576 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 RPL31P13-201ENST00000484151 370 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC139453.3-201ENST00000493276 369 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.37□□□□□ -1.71
GRIN3BO60391 AC022868.1-201ENST00000517767 391 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 IGKV2-26-201ENST00000518305 343 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.37□□□□□ -1.71
GRIN3BO60391 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.37□□□□□ -1.71
GRIN3BO60391 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.37□□□□□ -1.71
GRIN3BO60391 AC008962.1-201ENST00000605729 304 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 AC005046.1-201ENST00000608515 625 ntBASIC4.37□□□□□ -1.71
GRIN3BO60391 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
GRIN3BO60391 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
GRIN3BO60391 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 AL359854.1-201ENST00000614203 1594 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 RNA5SP167-201ENST00000365461 116 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RNU6-187P-201ENST00000384139 106 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 MIR607-201ENST00000385241 96 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RNU6-700P-201ENST00000391043 107 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RN7SKP111-201ENST00000410349 271 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RNA5SP306-201ENST00000411087 107 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 DBIP2-201ENST00000419076 262 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 SNRPEP9-201ENST00000436794 238 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RPL21P2-201ENST00000440049 481 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 RPL30P10-201ENST00000488148 337 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.36□□□□□ -1.71
GRIN3BO60391 RNY3P15-201ENST00000516297 97 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.36□□□□□ -1.71
GRIN3BO60391 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.36□□□□□ -1.71
GRIN3BO60391 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.36□□□□□ -1.71
GRIN3BO60391 AC005476.1-201ENST00000554427 397 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 AC103996.1-201ENST00000555468 102 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.36□□□□□ -1.71
GRIN3BO60391 AC004805.2-201ENST00000605382 482 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.36□□□□□ -1.71
GRIN3BO60391 AC141273.2-201ENST00000618989 130 ntBASIC4.36□□□□□ -1.71
GRIN3BO60391 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.36□□□□□ -1.71
GRIN3BO60391 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
GRIN3BO60391 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.35□□□□□ -1.71
GRIN3BO60391 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GRIN3BO60391 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GRIN3BO60391 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GRIN3BO60391 OR56A5-201ENST00000340110 738 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 Y_RNA.60-201ENST00000362831 98 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RNU4-50P-201ENST00000364361 141 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RNA5SP189-201ENST00000364920 115 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 SNORD113-1-201ENST00000365321 69 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RNU6-713P-201ENST00000384761 107 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GRIN3BO60391 RPS29P13-201ENST00000402041 169 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 MTCO3P19-201ENST00000415864 321 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RPL21P66-201ENST00000426566 466 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AC011742.1-201ENST00000431448 434 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 DYNLT3P2-201ENST00000442517 295 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 FCF1P4-201ENST00000448326 183 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AC006445.1-201ENST00000491925 405 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AK3P2-201ENST00000507976 429 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RNU2-53P-201ENST00000516257 147 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RNU6-612P-201ENST00000516909 102 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RRN3P3-201ENST00000549207 578 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 HMGB1P14-201ENST00000557424 591 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms