Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 CUL1P1-201ENST00000509510 2425 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RNA5SP322-201ENST00000363617 119 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RNU6-622P-201ENST00000384272 103 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 MIR487A-201ENST00000385009 80 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RNU6-651P-201ENST00000411040 105 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 SETP5-201ENST00000437270 562 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 MRPS10P1-201ENST00000448483 130 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AP001324.2-201ENST00000461163 319 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RPL31P61-201ENST00000496160 376 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AC074198.2-201ENST00000508153 258 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 VWA8P1-201ENST00000510889 176 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RN7SKP289-201ENST00000517244 295 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AP005660.1-201ENST00000522972 293 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AC079587.1-201ENST00000603846 277 ntBASIC3.72□□□□□ -1.81
SHISA3A0PJX4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHISA3A0PJX4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC002543.1-201ENST00000299783 1954 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 RNA5SP87-201ENST00000384155 118 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 RNU1-89P-201ENST00000384592 164 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MIR3065-201ENST00000390137 79 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 YPEL5P1-201ENST00000419731 367 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC010095.1-201ENST00000443543 144 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AP000705.1-201ENST00000454567 350 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 snoU13.6-201ENST00000458785 104 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC007215.1-201ENST00000464893 276 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 RPS23P7-201ENST00000466210 444 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 RPS29P22-201ENST00000472363 168 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 S100A11P1-201ENST00000477525 312 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 RNU6-581P-201ENST00000516214 105 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC006199.1-201ENST00000548728 219 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MIR3667-201ENST00000581025 74 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC020914.4-201ENST00000597690 277 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC004825.2-201ENST00000616634 455 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 AC027290.2-201ENST00000623210 18662 ntBASIC3.71□□□□□ -1.82
SHISA3A0PJX4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHISA3A0PJX4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 RNA5SP443-201ENST00000363083 132 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 RNU6-245P-201ENST00000384020 107 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 RNU6-918P-201ENST00000391219 106 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 PTMAP5-201ENST00000393073 333 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC099548.1-201ENST00000421443 426 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.7□□□□□ -1.82
SHISA3A0PJX4 AC108043.1-201ENST00000512696 574 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 RNU6-928P-201ENST00000516876 104 ntBASIC3.7□□□□□ -1.82
SHISA3A0PJX4 ACA59.2-201ENST00000517061 156 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms