Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 LINC01355-201ENST00000566551 5444 ntBASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXD3Q9UJU5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FOXD3Q9UJU5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FOXD3Q9UJU5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXD3Q9UJU5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FOXD3Q9UJU5 AC002546.1-201ENST00000588041 2504 ntBASIC4.15□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.233-201ENST00000364407 101 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.240-201ENST00000364469 95 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 AC245291.1-201ENST00000419501 328 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 RPL23AP3-201ENST00000453844 468 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 RPL36AP41-201ENST00000493820 306 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 AIG1P1-201ENST00000503376 148 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 RPL21P9-201ENST00000556149 474 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 MIR6758-201ENST00000620653 63 ntBASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXD3Q9UJU5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RNU1-62P-201ENST00000362599 164 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.217-201ENST00000364214 105 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC068538.1-201ENST00000376856 336 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RNY1P5-201ENST00000383890 115 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.498-201ENST00000384460 102 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RNU6-918P-201ENST00000391219 106 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RPL23AP26-201ENST00000412728 464 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RAB28P5-201ENST00000427490 651 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.641-201ENST00000459414 105 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RNU6-1278P-201ENST00000516130 107 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC015912.2-201ENST00000571053 181 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 MZT1P2-201ENST00000604387 248 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 SNRPGP20-201ENST00000604477 205 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC068831.7-201ENST00000616954 363 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 AC002076.2-201ENST00000617362 122 ntBASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXD3Q9UJU5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNU6-799P-201ENST00000363567 107 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNA5SP447-201ENST00000363749 119 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNU6-19P-201ENST00000384718 107 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 U3.22-201ENST00000391120 215 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 U3.26-201ENST00000391236 204 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNU6-493P-201ENST00000391321 108 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AL512633.1-201ENST00000399931 655 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RPL23AP48-201ENST00000406913 488 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RNU2-37P-201ENST00000410695 177 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 SNRPGP5-201ENST00000456003 220 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AL441985.1-201ENST00000457727 251 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RPL30P14-201ENST00000482744 348 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AC074198.2-201ENST00000508153 258 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AC134698.5-201ENST00000519444 336 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXD3Q9UJU5 AL136164.3-201ENST00000624429 3978 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RNU6-1248P-201ENST00000391096 64 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms