Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXD4L1Q9NU39 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXD4L1Q9NU39 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXD4L1Q9NU39 AC125336.1-201ENST00000508893 2827 ntBASIC6.63□□□□□ -1.35
FOXD4L1Q9NU39 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 MIR621-201ENST00000384919 96 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 SDHCP2-201ENST00000398565 501 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 MTATP8P2-201ENST00000435212 202 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC073465.2-201ENST00000440938 498 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 SNORD125-201ENST00000459538 96 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 RN7SL168P-201ENST00000463821 279 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC098818.1-201ENST00000478593 252 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 RN7SL193P-201ENST00000491708 276 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 RPS29P21-201ENST00000496272 170 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 RNU6ATAC17P-201ENST00000516074 71 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AP003730.1-201ENST00000524605 285 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 U6.73-201ENST00000619194 103 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 AC010680.1-201ENST00000590024 3590 ntBASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXD4L1Q9NU39 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 RNU6-1279P-201ENST00000383917 103 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 RNU6-1152P-201ENST00000384576 107 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 SNORA11.3-201ENST00000408471 128 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 MIR1294-201ENST00000408503 142 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 RPL30P4-201ENST00000429309 333 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 EIF5AP4-201ENST00000441206 465 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 AP000873.1-201ENST00000463987 400 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 RNU6-948P-201ENST00000516374 107 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 AC021678.3-201ENST00000517893 476 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 AC092266.1-201ENST00000610958 165 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 HOTTIP_4.1-201ENST00000618195 165 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 MALAT1.1-201ENST00000618249 95 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 SNORA11.6-201ENST00000619030 128 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 AC009487.4-201ENST00000624969 3585 ntBASIC6.61□□□□□ -1.35
FOXD4L1Q9NU39 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 RNU6-1134P-201ENST00000365156 101 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 REG1CP-206ENST00000447469 496 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 NXT1P1-201ENST00000458481 316 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 MRPS36P2-201ENST00000512569 299 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 MIR449C-201ENST00000516047 92 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 AP004609.2-201ENST00000532177 190 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 VN1R85P-201ENST00000601587 426 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 AC090517.3-201ENST00000625170 141 ntBASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXD4L1Q9NU39 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 MIR494-201ENST00000349529 81 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 SNORA17.1-201ENST00000362945 126 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 Y_RNA.78-201ENST00000362970 110 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 RNU6-414P-201ENST00000363705 104 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 RNA5SP187-201ENST00000384400 119 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 AL031121.1-201ENST00000406553 254 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 RNU7-23P-201ENST00000459465 62 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 AL136131.3-201ENST00000607600 188 ntBASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXD4L1Q9NU39 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
FOXD4L1Q9NU39 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
FOXD4L1Q9NU39 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms