Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC091286.1-201ENST00000431233 461 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 PIGFP3-201ENST00000441918 722 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 KC877373.1-201ENST00000479066 408 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC010265.1-201ENST00000513509 211 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 RNA5SP165-201ENST00000517142 115 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 SNORA81.3-201ENST00000517283 198 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC093023.1-201ENST00000547375 507 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 SYF2P1-201ENST00000550658 413 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC136932.1-201ENST00000574771 208 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC130289.1-201ENST00000577321 73 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 MIR4300-201ENST00000581016 96 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 RPL23AP78-201ENST00000599928 470 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.123-201ENST00000363338 102 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 RNU6-336P-201ENST00000364891 107 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.462-201ENST00000384268 102 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AL138878.1-201ENST00000405131 347 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AC098614.2-201ENST00000426040 255 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AL139109.1-201ENST00000455491 297 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 RN7SL604P-201ENST00000492589 296 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 RNU7-175P-201ENST00000515915 61 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 SNORA70.16-201ENST00000516390 95 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.706-201ENST00000516933 99 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 TRAV28-201ENST00000557548 323 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 FTX_2.1-201ENST00000618816 94 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 AC137590.2-201ENST00000619709 240 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 LINC02555-201ENST00000563933 1951 ntBASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
FOXP3Q9BZS1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 RNU6-1181P-201ENST00000384191 106 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 MIR548M-201ENST00000408260 86 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 RNU2-68P-201ENST00000410878 191 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AL590383.1-201ENST00000428602 75 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 snoU13.4-201ENST00000458916 104 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 RPL7P47-201ENST00000497299 556 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 ANXA2P1-201ENST00000505539 926 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 SNORA31.8-201ENST00000516327 108 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 DEFB108E-201ENST00000524692 240 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC060766.3-201ENST00000591442 263 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC244505.7-201ENST00000599675 272 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC027309.3-201ENST00000623419 351 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 AC112200.1-201ENST00000625015 234 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 CEP170P1-201ENST00000502249 4587 ntBASIC4.04□□□□□ -1.76
FOXP3Q9BZS1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU6-78P-201ENST00000362897 107 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.180-201ENST00000363867 113 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU6-72P-201ENST00000384285 79 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AL603910.2-201ENST00000407268 136 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 TMEM167AP1-201ENST00000423409 219 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 PRELID3BP1-201ENST00000457142 540 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU7-87P-201ENST00000459343 62 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU4-71P-201ENST00000516258 113 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU6-1338P-201ENST00000516328 91 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 RNU6-406P-201ENST00000516470 107 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 SCARNA4-202ENST00000625402 129 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AL450472.1-202ENST00000637286 180 ntBASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXP3Q9BZS1 AL133383.2-201ENST00000622958 2336 ntBASIC4.03□□□□□ -1.77
FOXP3Q9BZS1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
FOXP3Q9BZS1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms