Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-3Q9BYR4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP4-3Q9BYR4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AC010266.2-201ENST00000564741 3255 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AP002512.4-202ENST00000641599 4530 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RNA5SP258-201ENST00000362750 119 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-1284P-201ENST00000363701 100 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.443-201ENST00000384135 111 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 U3.40-201ENST00000408706 208 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA11-201ENST00000408789 128 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RN7SKP267-201ENST00000410381 285 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 COX5BP7-201ENST00000414780 274 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPS15AP40-201ENST00000419621 391 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPL36AP10-201ENST00000421785 322 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPL23AP38-201ENST00000423801 469 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL591419.1-201ENST00000427423 339 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPL12P46-201ENST00000436610 195 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL589765.3-201ENST00000446084 462 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPS4XP11-201ENST00000446897 772 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL360271.2-201ENST00000447710 161 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPL23AP75-201ENST00000491601 451 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RN7SL441P-201ENST00000492388 296 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL139099.1-201ENST00000497398 403 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AC093815.1-201ENST00000508637 280 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.689-201ENST00000516589 107 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-557P-201ENST00000516842 110 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA18.7-201ENST00000516910 131 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL110118.1-201ENST00000553543 400 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR5692A1-201ENST00000580523 69 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR3163-201ENST00000581592 73 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AC097639.2-201ENST00000603159 172 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL121932.1-201ENST00000605542 214 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AL360181.4-201ENST00000621752 134 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AC027309.3-201ENST00000623419 351 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CYP3A51P-201ENST00000633513 256 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR4275-201ENST00000636486 87 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 MAPK10-338ENST00000641647 3362 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CPHL1P-201ENST00000461341 3407 ntBASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP4-3Q9BYR4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF271P-202ENST00000465539 1970 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms