Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF31Q96EP0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
RNF31Q96EP0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF31Q96EP0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF31Q96EP0 AC007785.2-201ENST00000598627 1916 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF31Q96EP0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF31Q96EP0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC118273.1-201ENST00000525324 3006 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 Y_RNA.106-201ENST00000363189 100 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 RNU6-450P-201ENST00000364654 107 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 RNU6-99P-201ENST00000364721 107 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 RNU6-827P-201ENST00000365553 106 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 Y_RNA.401-201ENST00000383965 117 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 Y_RNA.574-201ENST00000384766 95 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 RNU6-823P-201ENST00000391042 103 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 Z82210.1-201ENST00000440037 231 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AL031274.1-201ENST00000450334 232 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC110794.1-201ENST00000505816 425 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 ACA59.1-201ENST00000515966 143 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 MIR4738-201ENST00000579134 87 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 7SK.7-201ENST00000603504 247 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 PRR13P7-201ENST00000605538 430 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AL136164.4-201ENST00000625013 2135 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 MIR4272-201ENST00000635924 64 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AP000553.6-201ENST00000641242 118 ntBASIC3.42□□□□□ -1.86
RNF31Q96EP0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RNF31Q96EP0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF31Q96EP0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF31Q96EP0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF31Q96EP0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 RNA5SP72-201ENST00000364442 117 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 MIR483-201ENST00000385070 76 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF31Q96EP0 AL591034.2-201ENST00000402839 359 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 U3.42-201ENST00000408746 214 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC005300.1-201ENST00000428401 373 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC009237.8-201ENST00000445492 379 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC115115.1-201ENST00000449927 248 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 SSXP4-201ENST00000451349 245 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF31Q96EP0 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 RNU6-572P-201ENST00000516724 80 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF31Q96EP0 AL645944.1-201ENST00000603857 493 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC004805.2-201ENST00000605382 482 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AL110115.1-201ENST00000614396 364 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 AL161629.2-201ENST00000615347 275 ntBASIC3.41□□□□□ -1.86
RNF31Q96EP0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.86
RNF31Q96EP0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RNF31Q96EP0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNF31Q96EP0 RPL9P7-201ENST00000330965 580 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 RNY1P16-201ENST00000363063 111 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 RNU4-42P-201ENST00000364738 142 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 MIR128-1-201ENST00000384921 82 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RNF31Q96EP0 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 SNORA11.2-201ENST00000408318 127 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AC092047.1-201ENST00000424997 240 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF31Q96EP0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF31Q96EP0 AL513043.1-201ENST00000439124 535 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AL078601.1-201ENST00000444542 271 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AC092798.1-201ENST00000458542 409 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 RPL9P9-202ENST00000466501 579 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AC008669.1-201ENST00000565823 2178 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AL162713.1-201ENST00000604480 262 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 AC006077.1-201ENST00000604746 343 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF31Q96EP0 U4.1-201ENST00000620349 87 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 MIR3651-201ENST00000630427 90 ntBASIC3.4□□□□□ -1.87
RNF31Q96EP0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF31Q96EP0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF31Q96EP0 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
RNF31Q96EP0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RNF31Q96EP0 CEP170P1-201ENST00000502249 4587 ntBASIC3.39□□□□□ -1.87
RNF31Q96EP0 Y_RNA.176-201ENST00000363815 109 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms