Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPS26P15-201ENST00000488067 348 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-377P-201ENST00000515965 102 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-567P-201ENST00000516746 107 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AC005255.1-201ENST00000593748 216 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 KLKP1-201ENST00000595979 403 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AL354798.1-201ENST00000622505 329 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 SAGE2P-201ENST00000420011 2126 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC009812.4-201ENST00000569134 1805 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.127-201ENST00000363386 109 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-312P-201ENST00000364629 107 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RNU4-56P-201ENST00000364700 142 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-20P-201ENST00000384106 107 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL390729.2-201ENST00000416137 156 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 POLR2KP2-201ENST00000438155 177 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL500522.2-201ENST00000448562 343 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RPL29P14-201ENST00000495837 428 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC010265.1-201ENST00000513509 211 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-1114P-201ENST00000516022 107 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC022968.1-201ENST00000567372 442 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 MIR4782-201ENST00000577987 79 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL359881.1-201ENST00000602916 267 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL133393.1-201ENST00000603277 287 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 RMST_6.1-201ENST00000611980 203 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 CR392039.5-201ENST00000623201 510 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL079305.1-201ENST00000623159 3008 ntBASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
SHKBP1Q8TBC3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AC116096.1-201ENST00000566804 2314 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RNA5SP124-201ENST00000362739 110 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 SNORD115-32-201ENST00000364079 82 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.218-201ENST00000364218 104 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-1325P-201ENST00000364905 105 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-1175P-201ENST00000365200 107 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 BTF3L4P2-201ENST00000392798 346 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 IFNA11P-201ENST00000446352 526 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AL133547.1-201ENST00000448546 220 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 FABP5P15-201ENST00000453566 214 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RPL23AP3-201ENST00000453844 468 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 HSPE1P6-201ENST00000479457 291 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AC005840.1-201ENST00000498412 377 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 HMGB3P3-201ENST00000510526 400 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 SNORA40.9-201ENST00000515895 93 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RN7SKP49-201ENST00000516675 260 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AL645944.1-201ENST00000603857 493 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.778-201ENST00000620203 90 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AP001005.3-201ENST00000622049 129 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AC012442.3-202ENST00000636742 206 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 U4.7-201ENST00000638126 106 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHKBP1Q8TBC3 Z82217.1-201ENST00000625157 8149 ntBASIC4.21□□□□□ -1.73
SHKBP1Q8TBC3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHKBP1Q8TBC3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.23-201ENST00000362496 106 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 RNA5SP197-201ENST00000363357 119 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.230-201ENST00000364348 109 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-968P-201ENST00000384076 107 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 MIR32-201ENST00000384965 70 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms