Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL020997.2-201ENST00000602607 184 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AL365440.1-201ENST00000436135 2167 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 Z73965.1-201ENST00000623412 2297 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 RNA5SP388-201ENST00000362584 119 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 RNU4-17P-201ENST00000365598 141 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 RNU6-843P-201ENST00000384454 104 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AP000907.1-201ENST00000428428 510 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 SNORD116-26-201ENST00000516006 96 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 RNU6-191P-201ENST00000516295 94 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 Y_RNA.694-201ENST00000516677 117 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 RN7SL703P-201ENST00000578485 302 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 MIR4431-201ENST00000579990 94 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AC023043.3-201ENST00000593113 385 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AL645944.1-201ENST00000603857 493 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AC006001.4-201ENST00000622243 395 ntBASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NEDD1Q8NHV4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RNU6-512P-201ENST00000364438 103 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RNU4-9P-201ENST00000364951 139 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 Y_RNA.369-201ENST00000365568 117 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RNU1-139P-201ENST00000391307 165 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AL691449.1-201ENST00000426570 421 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RPS15AP5-201ENST00000436276 388 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 HLA-N-201ENST00000437516 135 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RN7SL585P-201ENST00000470538 280 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AP000870.1-201ENST00000472927 406 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AC006517.1-201ENST00000480485 328 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AK3P2-201ENST00000507976 429 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 PPBPP1-201ENST00000510807 373 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 TRAV28-201ENST00000557548 323 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 CYP4A43P-201ENST00000568156 121 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 MIR1273C-201ENST00000578669 77 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 MIR4512-201ENST00000583257 77 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AL161629.2-201ENST00000615347 275 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 MIR6500-201ENST00000622700 86 ntBASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.74□□□□□ -1.65
NEDD1Q8NHV4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 SNORD35B-201ENST00000363660 87 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 RNU1-64P-201ENST00000365443 163 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 RNU6-213P-201ENST00000384051 104 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 RNU6-76P-201ENST00000384060 104 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AC009296.1-201ENST00000443146 155 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 RPS15AP34-201ENST00000487776 387 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 APOOP4-201ENST00000513530 597 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 RNA5SP76-201ENST00000516277 87 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AC005476.1-201ENST00000554427 397 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 MIR4782-201ENST00000577987 79 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AL606490.9-201ENST00000603331 271 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NEDD1Q8NHV4 MARK2P15-201ENST00000432204 2186 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 RNU4-80P-201ENST00000363200 141 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.72□□□□□ -1.65
NEDD1Q8NHV4 HMGB1P27-201ENST00000431429 603 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms