Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 CPHL1P-201ENST00000461341 3407 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU5A-1-201ENST00000362698 116 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU1-83P-201ENST00000363426 164 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU6-1155P-201ENST00000363554 107 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNA5SP173-201ENST00000364857 136 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU6-159P-201ENST00000391080 106 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.630-201ENST00000411370 108 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 HSPE1P13-201ENST00000451143 297 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC087588.1-201ENST00000462203 316 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNA5SP519-201ENST00000516480 119 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.685-201ENST00000516532 108 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RNU6-1007P-201ENST00000516586 107 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 CYCSP40-201ENST00000575927 294 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC079587.1-201ENST00000603846 277 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 MIR6500-201ENST00000622700 86 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AL592182.3-201ENST00000642132 3304 ntBASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AL133243.3-201ENST00000617415 3004 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 RNU6-137P-201ENST00000363680 108 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 SNORA8.3-201ENST00000384679 139 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 MT-TC-201ENST00000387405 66 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.584-201ENST00000391090 114 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AL121914.1-201ENST00000450188 156 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AC012671.1-201ENST00000451912 203 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AC099522.1-202ENST00000514718 367 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 SCARNA8-201ENST00000515924 131 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 RNU6-155P-201ENST00000516347 100 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 RNU6-453P-201ENST00000516819 85 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 SNORA31.22-201ENST00000517204 135 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AC005255.1-201ENST00000593748 216 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 AL078604.3-201ENST00000615580 211 ntBASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO4Q2I0M5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 MAPK10-304ENST00000641341 3984 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU4-10P-201ENST00000364383 140 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.348-201ENST00000365403 103 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 UBBP2-201ENST00000376781 231 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 U8.10-201ENST00000384260 133 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU6-880P-201ENST00000384526 107 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU6-178P-201ENST00000384631 104 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU6-1199P-201ENST00000411249 104 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 EIF1AXP1-201ENST00000419267 435 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AL714022.1-201ENST00000439897 151 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 ABCF2P2-201ENST00000450549 296 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RFPL4AP5-201ENST00000514977 504 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU6-1095P-201ENST00000516148 108 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RNU6-65P-201ENST00000516332 98 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RN7SKP83-201ENST00000516512 178 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 RPL23AP53-201ENST00000521854 457 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AC133485.4-201ENST00000561835 220 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AC138907.4-201ENST00000570107 226 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 AL391813.1-201ENST00000603098 260 ntBASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.22□□□□□ -1.73
RSPO4Q2I0M5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms