Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORA70-201ENST00000384436 135 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 EIF4HP2-201ENST00000424380 563 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 CKS1BP6-201ENST00000424932 240 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 H2AFZP5-201ENST00000446960 382 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF144AP50876 AC146507.2-201ENST00000460608 476 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 RPL23AP70-201ENST00000483361 460 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 AC093270.2-201ENST00000486157 792 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF144AP50876 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF144AP50876 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF144AP50876 RNU5E-3P-201ENST00000515913 68 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 CKS1BP7-201ENST00000522230 235 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 MTND5P34-201ENST00000568888 325 ntBASIC4.48□□□□□ -1.69
RNF144AP50876 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF144AP50876 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
RNF144AP50876 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF144AP50876 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RNF144AP50876 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF144AP50876 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF144AP50876 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF144AP50876 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF144AP50876 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF144AP50876 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF144AP50876 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF144AP50876 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF144AP50876 AC073073.2-201ENST00000609827 2578 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF144AP50876 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 RNU6-454P-201ENST00000364292 107 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 RNU6-755P-201ENST00000364400 103 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 RNU6-1264P-201ENST00000383891 107 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 SNORA72.4-201ENST00000384174 132 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 Y_RNA.521-201ENST00000384560 114 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 MIR15B-201ENST00000385045 98 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 YPEL5P1-201ENST00000419731 367 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 AC108751.2-201ENST00000469993 231 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 RNA5SP497-201ENST00000516081 97 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 SNORA31.16-201ENST00000516773 139 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF144AP50876 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF144AP50876 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF144AP50876 SNRPGP20-201ENST00000604477 205 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 AL591034.3-201ENST00000605511 685 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RNF144AP50876 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF144AP50876 SCN1A-220ENST00000641603 12506 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 ZNF702P-202ENST00000434269 1966 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 NEAT1-202ENST00000501122 22743 ntBASIC4.47□□□□□ -1.69
RNF144AP50876 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF144AP50876 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF144AP50876 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF144AP50876 MTND5P32-201ENST00000560711 1802 ntBASIC4.46□□□□□ -1.69
RNF144AP50876 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RNF144AP50876 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF144AP50876 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF144AP50876 SNORA74A-201ENST00000364089 198 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RNU6-217P-201ENST00000384164 104 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 MIR124-3-201ENST00000384866 87 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RNU1-82P-201ENST00000390851 165 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AL592291.1-201ENST00000403830 352 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AL355497.1-201ENST00000406262 551 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RNU6-588P-201ENST00000410281 105 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RNU6-710P-201ENST00000410424 105 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF144AP50876 RN7SL517P-201ENST00000462240 305 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RN7SL97P-201ENST00000486780 299 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RPL36AP41-201ENST00000493820 306 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 RNU6-709P-201ENST00000517257 104 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AP004242.1-201ENST00000533701 349 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AC009163.5-201ENST00000575421 637 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF144AP50876 AL391903.3-201ENST00000612158 163 ntBASIC4.46□□□□□ -1.7
RNF144AP50876 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RNF144AP50876 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF144AP50876 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF144AP50876 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RNF144AP50876 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF144AP50876 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF144AP50876 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF144AP50876 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC139713.2-215ENST00000641428 5037 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF144AP50876 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF144AP50876 Y_RNA.415-201ENST00000384012 112 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 RNU6-768P-201ENST00000384683 107 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AL031003.1-201ENST00000404229 172 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF144AP50876 HMGB3P8-201ENST00000449709 577 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC090525.1-201ENST00000479116 478 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF144AP50876 Y_RNA.712-201ENST00000517011 92 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.45□□□□□ -1.7
RNF144AP50876 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms