Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
CKS2P33552 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.53□□□□□ -2.32
CKS2P33552 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.53□□□□□ -2.32
CKS2P33552 AC119751.5-201ENST00000514077 770 ntBASIC0.53□□□□□ -2.32
CKS2P33552 RNU6-1102P-201ENST00000516149 96 ntBASIC0.53□□□□□ -2.32
CKS2P33552 SNORA26.10-201ENST00000516427 141 ntBASIC0.53□□□□□ -2.32
CKS2P33552 RNA5SP437-201ENST00000517249 129 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.53□□□□□ -2.32
CKS2P33552 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.53□□□□□ -2.32
CKS2P33552 MIR4698-201ENST00000577795 80 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AF131215.7-201ENST00000602443 707 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AL158827.2-201ENST00000602494 330 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.53□□□□□ -2.32
CKS2P33552 AC013412.1-201ENST00000610687 192 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AL691447.3-201ENST00000635020 330 ntBASIC0.53□□□□□ -2.32
CKS2P33552 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.53□□□□□ -2.32
CKS2P33552 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
CKS2P33552 MIR3529-201ENST00000637713 78 ntBASIC0.53□□□□□ -2.32
CKS2P33552 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CKS2P33552 Y_RNA.111-201ENST00000363248 100 ntBASIC0.52□□□□□ -2.33
CKS2P33552 RNU6-166P-201ENST00000384371 107 ntBASIC0.52□□□□□ -2.33
CKS2P33552 RNU6-14P-201ENST00000384630 106 ntBASIC0.52□□□□□ -2.33
CKS2P33552 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CKS2P33552 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
CKS2P33552 UBE2V1P10-201ENST00000414685 269 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.52□□□□□ -2.33
CKS2P33552 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.52□□□□□ -2.33
CKS2P33552 DEFB130D-201ENST00000426866 237 ntBASIC0.52□□□□□ -2.33
CKS2P33552 TRIM60P13-201ENST00000432350 1283 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.52□□□□□ -2.33
CKS2P33552 ELOCP30-201ENST00000447108 299 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.52□□□□□ -2.33
CKS2P33552 AC010468.3-201ENST00000508225 458 ntBASIC0.52□□□□□ -2.33
CKS2P33552 RN7SKP88-201ENST00000516847 250 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.52□□□□□ -2.33
CKS2P33552 AC025678.1-201ENST00000567861 338 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AC137800.2-201ENST00000574375 120 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.52□□□□□ -2.33
CKS2P33552 AL365434.2-201ENST00000607979 234 ntBASIC0.52□□□□□ -2.33
CKS2P33552 7SK.8-201ENST00000612110 250 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AC040896.1-201ENST00000613819 479 ntBASIC0.52□□□□□ -2.33
CKS2P33552 7SK.11-201ENST00000615477 250 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AL589994.2-201ENST00000621124 579 ntBASIC0.52□□□□□ -2.33
CKS2P33552 7SK.13-201ENST00000622040 250 ntBASIC0.52□□□□□ -2.33
CKS2P33552 AC091895.1-201ENST00000624494 256 ntBASIC0.52□□□□□ -2.33
CKS2P33552 LINC02555-201ENST00000563933 1951 ntBASIC0.52□□□□□ -2.33
CKS2P33552 RNU11-5P-201ENST00000391216 129 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RNU2-42P-201ENST00000410697 113 ntBASIC0.51□□□□□ -2.33
CKS2P33552 USP9YP33-201ENST00000412220 421 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC016831.2-201ENST00000417179 352 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC009518.2-201ENST00000418056 731 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RPS15AP12-201ENST00000419498 388 ntBASIC0.51□□□□□ -2.33
CKS2P33552 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 SNX2P2-201ENST00000424553 323 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AL365400.1-201ENST00000431854 640 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RPS27AP8-201ENST00000452665 445 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RNU1-131P-201ENST00000458943 161 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RNA5SP269-201ENST00000459032 137 ntBASIC0.51□□□□□ -2.33
CKS2P33552 snoU13.26-201ENST00000459452 105 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AL163195.1-201ENST00000496941 348 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC097473.1-201ENST00000508142 408 ntBASIC0.51□□□□□ -2.33
CKS2P33552 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CKS2P33552 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.51□□□□□ -2.33
CKS2P33552 RNU6-197P-201ENST00000516680 100 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CKS2P33552 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 MTCYBP33-201ENST00000575007 1130 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS2P33552 AL391813.2-201ENST00000609113 322 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC233981.2-201ENST00000611524 1614 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC123767.1-202ENST00000620407 817 ntBASIC0.51□□□□□ -2.33
CKS2P33552 AC092656.1-203ENST00000624134 423 ntBASIC0.51□□□□□ -2.33
CKS2P33552 HSBP1P2-201ENST00000299671 229 ntBASIC0.5□□□□□ -2.33
CKS2P33552 snoU2_19.1-201ENST00000362361 80 ntBASIC0.5□□□□□ -2.33
CKS2P33552 MIR19B1-201ENST00000384829 87 ntBASIC0.5□□□□□ -2.33
CKS2P33552 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
CKS2P33552 MIR194-1-201ENST00000384892 85 ntBASIC0.5□□□□□ -2.33
CKS2P33552 SNORA17.3-201ENST00000391159 129 ntBASIC0.5□□□□□ -2.33
CKS2P33552 MTCO1P56-201ENST00000401674 224 ntBASIC0.5□□□□□ -2.33
CKS2P33552 Y_RNA.597-201ENST00000410463 100 ntBASIC0.5□□□□□ -2.33
CKS2P33552 RNU2-23P-201ENST00000410545 195 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC004965.1-201ENST00000413033 213 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.5□□□□□ -2.33
CKS2P33552 RAC1P6-201ENST00000423911 575 ntBASIC0.5□□□□□ -2.33
CKS2P33552 CBX3P6-201ENST00000430257 527 ntBASIC0.5□□□□□ -2.33
CKS2P33552 RPS15AP10-201ENST00000432472 382 ntBASIC0.5□□□□□ -2.33
CKS2P33552 TIMM9P1-201ENST00000436122 256 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC005094.1-201ENST00000440420 368 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.5□□□□□ -2.33
CKS2P33552 AL606517.1-201ENST00000446914 387 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC079776.3-201ENST00000450665 370 ntBASIC0.5□□□□□ -2.33
CKS2P33552 RPL18AP17-201ENST00000455326 198 ntBASIC0.5□□□□□ -2.33
CKS2P33552 COX6CP14-201ENST00000469580 174 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC134050.1-201ENST00000495088 933 ntBASIC0.5□□□□□ -2.33
CKS2P33552 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.5□□□□□ -2.33
CKS2P33552 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.5□□□□□ -2.33
CKS2P33552 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms