Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP89-201ENST00000410300 108 ntBASIC4.81□□□□□ -1.64
VARSP26640 AL160275.2-201ENST00000412010 394 ntBASIC4.81□□□□□ -1.64
VARSP26640 RPS26P42-201ENST00000413485 326 ntBASIC4.81□□□□□ -1.64
VARSP26640 AC009237.10-201ENST00000414112 510 ntBASIC4.81□□□□□ -1.64
VARSP26640 AC244670.1-201ENST00000436879 112 ntBASIC4.81□□□□□ -1.64
VARSP26640 AC009237.8-201ENST00000445492 379 ntBASIC4.81□□□□□ -1.64
VARSP26640 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.81□□□□□ -1.64
VARSP26640 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
VARSP26640 COX6B1P5-201ENST00000509843 249 ntBASIC4.81□□□□□ -1.64
VARSP26640 SNORA70.16-201ENST00000516390 95 ntBASIC4.81□□□□□ -1.64
VARSP26640 Vault.1-201ENST00000516474 102 ntBASIC4.81□□□□□ -1.64
VARSP26640 AC090281.1-201ENST00000523019 276 ntBASIC4.81□□□□□ -1.64
VARSP26640 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.81□□□□□ -1.64
VARSP26640 CR383656.8-201ENST00000549046 145 ntBASIC4.81□□□□□ -1.64
VARSP26640 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.81□□□□□ -1.64
VARSP26640 AC023043.3-201ENST00000593113 385 ntBASIC4.81□□□□□ -1.64
VARSP26640 SNX18P1Y-201ENST00000616231 511 ntBASIC4.81□□□□□ -1.64
VARSP26640 MIR6810-201ENST00000622701 70 ntBASIC4.81□□□□□ -1.64
VARSP26640 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VARSP26640 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.81□□□□□ -1.64
VARSP26640 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VARSP26640 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.81□□□□□ -1.64
VARSP26640 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VARSP26640 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.81□□□□□ -1.64
VARSP26640 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.8□□□□□ -1.64
VARSP26640 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARSP26640 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VARSP26640 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARSP26640 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARSP26640 RNA5SP428-201ENST00000365129 132 ntBASIC4.8□□□□□ -1.64
VARSP26640 RNU6-969P-201ENST00000383900 105 ntBASIC4.8□□□□□ -1.64
VARSP26640 RNU6-643P-201ENST00000384018 107 ntBASIC4.8□□□□□ -1.64
VARSP26640 MIR616-201ENST00000385293 97 ntBASIC4.8□□□□□ -1.64
VARSP26640 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.8□□□□□ -1.64
VARSP26640 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.8□□□□□ -1.64
VARSP26640 HMGB1P37-201ENST00000439613 609 ntBASIC4.8□□□□□ -1.64
VARSP26640 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.8□□□□□ -1.64
VARSP26640 MTATP6P7-201ENST00000453315 681 ntBASIC4.8□□□□□ -1.64
VARSP26640 AC146507.2-201ENST00000460608 476 ntBASIC4.8□□□□□ -1.64
VARSP26640 Y_RNA.712-201ENST00000517011 92 ntBASIC4.8□□□□□ -1.64
VARSP26640 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
VARSP26640 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.8□□□□□ -1.64
VARSP26640 MIR3646-201ENST00000578301 84 ntBASIC4.8□□□□□ -1.64
VARSP26640 MIR4270-201ENST00000581799 70 ntBASIC4.8□□□□□ -1.64
VARSP26640 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.8□□□□□ -1.64
VARSP26640 AL021997.2-201ENST00000615674 271 ntBASIC4.8□□□□□ -1.64
VARSP26640 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.79□□□□□ -1.64
VARSP26640 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VARSP26640 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARSP26640 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARSP26640 SNORA73.1-201ENST00000363107 205 ntBASIC4.79□□□□□ -1.64
VARSP26640 RNU1-100P-201ENST00000365255 165 ntBASIC4.79□□□□□ -1.64
VARSP26640 RNU6-768P-201ENST00000384683 107 ntBASIC4.79□□□□□ -1.64
VARSP26640 MIR325-201ENST00000385260 98 ntBASIC4.79□□□□□ -1.64
VARSP26640 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
VARSP26640 RNU6-588P-201ENST00000410281 105 ntBASIC4.79□□□□□ -1.64
VARSP26640 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
VARSP26640 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.79□□□□□ -1.64
VARSP26640 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.79□□□□□ -1.64
VARSP26640 AC125238.1-201ENST00000448842 249 ntBASIC4.79□□□□□ -1.64
VARSP26640 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARSP26640 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
VARSP26640 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.79□□□□□ -1.64
VARSP26640 AC008033.2-201ENST00000542626 177 ntBASIC4.79□□□□□ -1.64
VARSP26640 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.79□□□□□ -1.64
VARSP26640 CYCSP40-201ENST00000575927 294 ntBASIC4.79□□□□□ -1.64
VARSP26640 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.79□□□□□ -1.64
VARSP26640 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.79□□□□□ -1.64
VARSP26640 AC118273.1-201ENST00000525324 3006 ntBASIC4.79□□□□□ -1.64
VARSP26640 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARSP26640 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VARSP26640 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.79□□□□□ -1.64
VARSP26640 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.79□□□□□ -1.64
VARSP26640 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.79□□□□□ -1.64
VARSP26640 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VARSP26640 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 RNU6-799P-201ENST00000363567 107 ntBASIC4.78□□□□□ -1.64
VARSP26640 SNORA62-201ENST00000365493 153 ntBASIC4.78□□□□□ -1.64
VARSP26640 RNU6-245P-201ENST00000384020 107 ntBASIC4.78□□□□□ -1.64
VARSP26640 MIR15B-201ENST00000385045 98 ntBASIC4.78□□□□□ -1.64
VARSP26640 FTH1P15-201ENST00000406984 280 ntBASIC4.78□□□□□ -1.64
VARSP26640 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.78□□□□□ -1.64
VARSP26640 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.78□□□□□ -1.64
VARSP26640 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.78□□□□□ -1.64
VARSP26640 snoU13.20-201ENST00000459180 104 ntBASIC4.78□□□□□ -1.64
VARSP26640 AC007215.1-201ENST00000464893 276 ntBASIC4.78□□□□□ -1.64
VARSP26640 RPL36AP41-201ENST00000493820 306 ntBASIC4.78□□□□□ -1.64
VARSP26640 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.78□□□□□ -1.64
VARSP26640 RNU6-168P-201ENST00000516189 101 ntBASIC4.78□□□□□ -1.64
VARSP26640 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VARSP26640 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.78□□□□□ -1.64
VARSP26640 AL391261.4-201ENST00000616012 481 ntBASIC4.78□□□□□ -1.64
VARSP26640 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
VARSP26640 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARSP26640 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
VARSP26640 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms