Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SNORD45B-201ENST00000364617 72 ntBASIC5.79□□□□□ -1.48
CD44P16070 RNU6-1280P-201ENST00000365211 107 ntBASIC5.79□□□□□ -1.48
CD44P16070 RNU6-438P-201ENST00000365561 103 ntBASIC5.79□□□□□ -1.48
CD44P16070 RNU1-73P-201ENST00000383971 164 ntBASIC5.79□□□□□ -1.48
CD44P16070 RNA5SP339-201ENST00000390987 122 ntBASIC5.79□□□□□ -1.48
CD44P16070 SDHDP6-201ENST00000414693 480 ntBASIC5.79□□□□□ -1.48
CD44P16070 CYCSP48-201ENST00000417124 323 ntBASIC5.79□□□□□ -1.48
CD44P16070 RPL37P4-201ENST00000448908 268 ntBASIC5.79□□□□□ -1.48
CD44P16070 RN7SL807P-201ENST00000470923 297 ntBASIC5.79□□□□□ -1.48
CD44P16070 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 AC126177.5-201ENST00000549599 178 ntBASIC5.79□□□□□ -1.48
CD44P16070 AC073413.2-201ENST00000604332 360 ntBASIC5.79□□□□□ -1.48
CD44P16070 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.79□□□□□ -1.48
CD44P16070 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.79□□□□□ -1.48
CD44P16070 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD44P16070 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD44P16070 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.78□□□□□ -1.48
CD44P16070 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD44P16070 AC016588.2-201ENST00000632484 3021 ntBASIC5.78□□□□□ -1.48
CD44P16070 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD44P16070 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CD44P16070 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CD44P16070 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.78□□□□□ -1.48
CD44P16070 RNU6-750P-201ENST00000390946 107 ntBASIC5.78□□□□□ -1.48
CD44P16070 MIR1265-201ENST00000408444 86 ntBASIC5.78□□□□□ -1.48
CD44P16070 RN7SKP156-201ENST00000410308 342 ntBASIC5.78□□□□□ -1.48
CD44P16070 RNU6-733P-201ENST00000410759 104 ntBASIC5.78□□□□□ -1.48
CD44P16070 RPS29P14-201ENST00000431518 171 ntBASIC5.78□□□□□ -1.48
CD44P16070 RN7SL273P-201ENST00000481561 299 ntBASIC5.78□□□□□ -1.48
CD44P16070 RN7SL547P-201ENST00000490793 290 ntBASIC5.78□□□□□ -1.48
CD44P16070 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CD44P16070 RNU6-523P-201ENST00000516304 54 ntBASIC5.78□□□□□ -1.48
CD44P16070 HMGB1P40-201ENST00000525121 540 ntBASIC5.78□□□□□ -1.48
CD44P16070 AC107918.3-201ENST00000533272 382 ntBASIC5.78□□□□□ -1.48
CD44P16070 AC008507.4-201ENST00000585464 127 ntBASIC5.78□□□□□ -1.48
CD44P16070 MIR8080-201ENST00000622224 89 ntBASIC5.78□□□□□ -1.48
CD44P16070 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.78□□□□□ -1.48
CD44P16070 MIR376A2-201ENST00000636782 80 ntBASIC5.78□□□□□ -1.48
CD44P16070 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CD44P16070 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD44P16070 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.77□□□□□ -1.49
CD44P16070 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD44P16070 U3.3-201ENST00000362986 216 ntBASIC5.77□□□□□ -1.49
CD44P16070 Y_RNA.95-201ENST00000363079 95 ntBASIC5.77□□□□□ -1.49
CD44P16070 Y_RNA.155-201ENST00000363632 101 ntBASIC5.77□□□□□ -1.49
CD44P16070 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CD44P16070 SNORD24-201ENST00000383884 75 ntBASIC5.77□□□□□ -1.49
CD44P16070 MIR105-1-201ENST00000385222 81 ntBASIC5.77□□□□□ -1.49
CD44P16070 RNA5SP354-201ENST00000391247 136 ntBASIC5.77□□□□□ -1.49
CD44P16070 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.77□□□□□ -1.49
CD44P16070 Y_RNA.666-201ENST00000516187 112 ntBASIC5.77□□□□□ -1.49
CD44P16070 MIR5197-201ENST00000583721 112 ntBASIC5.77□□□□□ -1.49
CD44P16070 AC008521.2-201ENST00000591021 259 ntBASIC5.77□□□□□ -1.49
CD44P16070 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CD44P16070 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CD44P16070 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.77□□□□□ -1.49
CD44P16070 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 PHKBP1-201ENST00000450951 1951 ntBASIC5.76□□□□□ -1.49
CD44P16070 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.76□□□□□ -1.49
CD44P16070 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CD44P16070 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 SNORD116-10-201ENST00000363791 102 ntBASIC5.76□□□□□ -1.49
CD44P16070 RNU6-1305P-201ENST00000364353 104 ntBASIC5.76□□□□□ -1.49
CD44P16070 RNA5SP90-201ENST00000364801 99 ntBASIC5.76□□□□□ -1.49
CD44P16070 RNA5SP223-201ENST00000365174 120 ntBASIC5.76□□□□□ -1.49
CD44P16070 AC009804.1-201ENST00000400949 179 ntBASIC5.76□□□□□ -1.49
CD44P16070 MTND4LP19-201ENST00000403051 166 ntBASIC5.76□□□□□ -1.49
CD44P16070 RN7SKP286-201ENST00000410894 299 ntBASIC5.76□□□□□ -1.49
CD44P16070 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.76□□□□□ -1.49
CD44P16070 AC009238.1-201ENST00000442165 424 ntBASIC5.76□□□□□ -1.49
CD44P16070 AC009237.6-201ENST00000446969 424 ntBASIC5.76□□□□□ -1.49
CD44P16070 PPIAP21-201ENST00000464473 501 ntBASIC5.76□□□□□ -1.49
CD44P16070 AC022790.1-201ENST00000522872 204 ntBASIC5.76□□□□□ -1.49
CD44P16070 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 AC022404.1-201ENST00000555320 273 ntBASIC5.76□□□□□ -1.49
CD44P16070 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.76□□□□□ -1.49
CD44P16070 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.76□□□□□ -1.49
CD44P16070 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CD44P16070 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
CD44P16070 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD44P16070 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.76□□□□□ -1.49
CD44P16070 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CD44P16070 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CD44P16070 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 AC126323.6-202ENST00000568092 3511 ntBASIC5.75□□□□□ -1.49
CD44P16070 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms