Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.61□□□□□ -1.83
PAX4O43316 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.61□□□□□ -1.83
PAX4O43316 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PAX4O43316 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PAX4O43316 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PAX4O43316 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PAX4O43316 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.61□□□□□ -1.83
PAX4O43316 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PAX4O43316 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PAX4O43316 MAPK10-304ENST00000641341 3984 ntBASIC3.61□□□□□ -1.83
PAX4O43316 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.6□□□□□ -1.83
PAX4O43316 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
PAX4O43316 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.6□□□□□ -1.83
PAX4O43316 MAPK10-263ENST00000641052 4307 ntBASIC3.6□□□□□ -1.83
PAX4O43316 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PAX4O43316 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 Y_RNA.93-201ENST00000363066 109 ntBASIC3.6□□□□□ -1.83
PAX4O43316 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 RNU6-793P-201ENST00000384233 104 ntBASIC3.6□□□□□ -1.83
PAX4O43316 RNU6-675P-201ENST00000384236 104 ntBASIC3.6□□□□□ -1.83
PAX4O43316 Y_RNA.565-201ENST00000384719 101 ntBASIC3.6□□□□□ -1.83
PAX4O43316 MT-TI-201ENST00000387365 69 ntBASIC3.6□□□□□ -1.83
PAX4O43316 COX5BP7-201ENST00000414780 274 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.6□□□□□ -1.83
PAX4O43316 AL772161.1-201ENST00000439130 476 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AL389915.2-201ENST00000454576 441 ntBASIC3.6□□□□□ -1.83
PAX4O43316 RNU7-171P-201ENST00000459581 62 ntBASIC3.6□□□□□ -1.83
PAX4O43316 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.6□□□□□ -1.83
PAX4O43316 AC006517.1-201ENST00000480485 328 ntBASIC3.6□□□□□ -1.83
PAX4O43316 RN7SL629P-201ENST00000489622 285 ntBASIC3.6□□□□□ -1.83
PAX4O43316 RNU6-1095P-201ENST00000516148 108 ntBASIC3.6□□□□□ -1.83
PAX4O43316 RNA5SP360-201ENST00000516555 118 ntBASIC3.6□□□□□ -1.83
PAX4O43316 IGKV3-31-201ENST00000523109 329 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AC068339.1-201ENST00000526965 141 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.6□□□□□ -1.83
PAX4O43316 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.6□□□□□ -1.83
PAX4O43316 RN7SL753P-201ENST00000581238 290 ntBASIC3.6□□□□□ -1.83
PAX4O43316 MIR3936-201ENST00000584304 110 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AC025946.2-201ENST00000603398 234 ntBASIC3.6□□□□□ -1.83
PAX4O43316 ARF4P1-201ENST00000605447 541 ntBASIC3.6□□□□□ -1.83
PAX4O43316 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
PAX4O43316 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.6□□□□□ -1.83
PAX4O43316 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.6□□□□□ -1.83
PAX4O43316 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PAX4O43316 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.59□□□□□ -1.83
PAX4O43316 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
PAX4O43316 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.59□□□□□ -1.83
PAX4O43316 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 RNU1-72P-201ENST00000362976 153 ntBASIC3.59□□□□□ -1.83
PAX4O43316 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
PAX4O43316 RNU6-1240P-201ENST00000365155 104 ntBASIC3.59□□□□□ -1.83
PAX4O43316 SNORA2.3-201ENST00000383920 135 ntBASIC3.59□□□□□ -1.83
PAX4O43316 Y_RNA.415-201ENST00000384012 112 ntBASIC3.59□□□□□ -1.83
PAX4O43316 RNU6-402P-201ENST00000410678 103 ntBASIC3.59□□□□□ -1.83
PAX4O43316 RPL31P2-201ENST00000413849 377 ntBASIC3.59□□□□□ -1.83
PAX4O43316 AL139148.1-201ENST00000427122 680 ntBASIC3.59□□□□□ -1.83
PAX4O43316 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.59□□□□□ -1.83
PAX4O43316 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.59□□□□□ -1.83
PAX4O43316 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.59□□□□□ -1.83
PAX4O43316 RNU6-572P-201ENST00000516724 80 ntBASIC3.59□□□□□ -1.83
PAX4O43316 RNA5SP34-201ENST00000516887 130 ntBASIC3.59□□□□□ -1.83
PAX4O43316 BNIP3P1-201ENST00000547295 580 ntBASIC3.59□□□□□ -1.83
PAX4O43316 MIR6886-201ENST00000619864 61 ntBASIC3.59□□□□□ -1.83
PAX4O43316 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 PHKBP1-201ENST00000450951 1951 ntBASIC3.59□□□□□ -1.83
PAX4O43316 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAX4O43316 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PAX4O43316 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PAX4O43316 AP001273.1-201ENST00000624493 3152 ntBASIC3.59□□□□□ -1.84
PAX4O43316 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PAX4O43316 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PAX4O43316 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PAX4O43316 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.58□□□□□ -1.84
PAX4O43316 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.58□□□□□ -1.84
PAX4O43316 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PAX4O43316 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PAX4O43316 RPL23P2-201ENST00000320371 421 ntBASIC3.58□□□□□ -1.84
PAX4O43316 Y_RNA.78-201ENST00000362970 110 ntBASIC3.58□□□□□ -1.84
PAX4O43316 U3.2-201ENST00000362981 210 ntBASIC3.58□□□□□ -1.84
PAX4O43316 Y_RNA.91-201ENST00000363042 107 ntBASIC3.58□□□□□ -1.84
PAX4O43316 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
PAX4O43316 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PAX4O43316 RNU6-821P-201ENST00000390995 107 ntBASIC3.58□□□□□ -1.84
PAX4O43316 CYB5AP4-201ENST00000396692 399 ntBASIC3.58□□□□□ -1.84
PAX4O43316 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.58□□□□□ -1.84
PAX4O43316 RNA5SP103-201ENST00000459503 118 ntBASIC3.58□□□□□ -1.84
PAX4O43316 RN7SL244P-201ENST00000493405 297 ntBASIC3.58□□□□□ -1.84
PAX4O43316 SCARNA21.2-201ENST00000516600 166 ntBASIC3.58□□□□□ -1.84
PAX4O43316 SNORA43.2-201ENST00000516652 128 ntBASIC3.58□□□□□ -1.84
PAX4O43316 RN7SKP66-201ENST00000516681 231 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms