Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC104985.3-201ENST00000623479 597 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AP003476.1-201ENST00000623984 516 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-944P-201ENST00000364023 107 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-853P-201ENST00000364306 107 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-439P-201ENST00000384188 106 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RPS12P24-201ENST00000412619 387 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 MTND4P3-201ENST00000417829 541 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC083875.1-201ENST00000419509 405 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC139712.2-201ENST00000424302 339 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 BTBD7P2-201ENST00000441962 620 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 EEF1E1P1-201ENST00000446998 430 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 ZNF886P-201ENST00000450781 723 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 SNORD97-201ENST00000459187 142 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC087477.1-201ENST00000465747 340 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AP001025.1-201ENST00000486139 332 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC113347.3-201ENST00000509113 148 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-1315P-201ENST00000517187 99 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AP005660.1-201ENST00000522972 293 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 RRN3P3-201ENST00000549207 578 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC123912.5-201ENST00000605470 343 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC024060.1-201ENST00000607052 494 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC112204.3-201ENST00000623822 332 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 AC092656.1-203ENST00000624134 423 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRAV3A0A0B4J244 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-655P-201ENST00000362858 107 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-1210P-201ENST00000363775 107 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.238-201ENST00000364441 102 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 MIR29B2-201ENST00000385055 81 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 MIR1284-201ENST00000408337 120 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 MTCO1P17-201ENST00000411522 491 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AL359704.1-201ENST00000411586 781 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC092648.1-201ENST00000425870 423 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 SNRPGP9-201ENST00000456025 225 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 SNORA31.17-201ENST00000516953 127 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AP003049.1-201ENST00000529418 457 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 RAB11AP2-201ENST00000545905 639 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC012414.6-201ENST00000568241 401 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC007363.1-201ENST00000604736 620 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC092140.2-201ENST00000618027 521 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AL589994.2-201ENST00000621124 579 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 MTND5P42-201ENST00000637720 498 ntBASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV3A0A0B4J244 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.40-201ENST00000362645 93 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-271P-201ENST00000363858 105 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC119751.3-201ENST00000399720 670 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RNU2-23P-201ENST00000410545 195 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RNA5SP247-201ENST00000411181 105 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 NEFMP1-201ENST00000443423 1006 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 PAXBP1P1-201ENST00000449315 447 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 snoU13.9-201ENST00000458927 103 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-333P-201ENST00000459117 107 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-953P-201ENST00000459154 107 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RPS26P55-201ENST00000471178 356 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 OR2A41P-201ENST00000473586 105 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RPL30P12-201ENST00000474666 353 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RPL30P7-201ENST00000479312 323 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 RPL30P1-201ENST00000488676 339 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC093259.1-201ENST00000509755 300 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC008837.2-201ENST00000513076 418 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 MTND1P36-201ENST00000522384 936 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 DEFB108A-201ENST00000530110 222 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms