Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA3Q9Y5H0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 FAM8A6P-201ENST00000407496 1135 ntBASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA3Q9Y5H0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 AC092338.2-201ENST00000568827 1415 ntBASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 AC117947.1-201ENST00000427448 529 ntBASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 AC007663.1-201ENST00000438948 1240 ntBASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 TSPY17P-201ENST00000450329 467 ntBASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA3Q9Y5H0 BX119927.1-201ENST00000636596 1552 ntBASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 RNF152P1-201ENST00000397754 604 ntBASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 AL023803.3-201ENST00000615559 522 ntBASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 AC125437.2-201ENST00000625180 2167 ntBASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 AP001271.2-201ENST00000624018 1556 ntBASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA3Q9Y5H0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms