Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 BX323043.1-201ENST00000641006 1765 ntBASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 CKBP1-201ENST00000565489 1086 ntBASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 MIR4497-201ENST00000583208 89 ntBASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB13Q9Y5F0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 AC093827.2-201ENST00000512654 315 ntBASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB13Q9Y5F0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB13Q9Y5F0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHB13Q9Y5F0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB13Q9Y5F0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms