Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC087388.1-201ENST00000571370 1112 ntBASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 CCR12P-201ENST00000446203 998 ntBASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 Z85996.1-201ENST00000494644 937 ntBASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
NPIPA1Q9UND3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPA1Q9UND3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC007952.6-201ENST00000573168 2673 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC003957.1-201ENST00000625108 2673 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC006011.2-201ENST00000621313 1158 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 BCL2-203ENST00000589955 5011 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC096733.2-201ENST00000609937 1394 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 LINC01465-201ENST00000408887 1940 ntBASIC17.51■□□□□ 0.39
NPIPA1Q9UND3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 HMGA1P5-201ENST00000412453 271 ntBASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 BX664615.1-201ENST00000443558 458 ntBASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 WWOX-216ENST00000569818 525 ntBASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPIPA1Q9UND3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA1Q9UND3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms