Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBP1Q9NZI7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 AC008040.2-201ENST00000461049 708 ntBASIC19.35■□□□□ 0.69
UBP1Q9NZI7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.35■□□□□ 0.69
UBP1Q9NZI7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 KRT8P11-201ENST00000409686 1436 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 AL135905.2-201ENST00000584934 1404 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 AC004951.3-201ENST00000418645 1148 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 AC011506.1-201ENST00000474329 610 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 AC113410.3-201ENST00000623366 203 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 RNF165-205ENST00000588679 2904 ntBASIC19.34■□□□□ 0.69
UBP1Q9NZI7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBP1Q9NZI7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.33■□□□□ 0.69
UBP1Q9NZI7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 AC011298.2-201ENST00000617989 482 ntBASIC19.33■□□□□ 0.68
UBP1Q9NZI7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.68
UBP1Q9NZI7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms