Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 TSPY17P-201ENST00000450329 467 ntBASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 AP003041.3-201ENST00000527151 707 ntBASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 AC008622.2-201ENST00000617006 1229 ntBASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 FP475955.4-201ENST00000623131 1990 ntBASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 RCN1P1-201ENST00000400413 996 ntBASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AL049812.1-201ENST00000432563 2267 ntBASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPHK1Q9NYA1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AC005521.1-201ENST00000393351 872 ntBASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AC113347.1-201ENST00000413321 391 ntBASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 KRT18P21-201ENST00000515767 1272 ntBASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AC010203.1-204ENST00000548782 407 ntBASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AL161938.1-201ENST00000569833 2180 ntBASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK1Q9NYA1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 TERF1P1-201ENST00000311003 1181 ntBASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 MIR4674-201ENST00000582457 87 ntBASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 AC010653.2-201ENST00000623505 997 ntBASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK1Q9NYA1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK1Q9NYA1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK1Q9NYA1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK1Q9NYA1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SPHK1Q9NYA1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms