Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 CKBP1-201ENST00000565489 1086 ntBASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 MIR4785-201ENST00000585005 73 ntBASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN4Q9NRR5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 AP003071.4-201ENST00000562276 1284 ntBASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 REXO1L10P-201ENST00000615707 1290 ntBASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 REXO1L12P-201ENST00000622156 912 ntBASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN4Q9NRR5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN4Q9NRR5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms