Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SEPT5-208ENST00000431124 920 ntTSL 523.82■■□□□ 1.41e-6■■■□□ 14.6
DROSHAQ9NRR4 GSE1-205ENST00000412692 6625 ntTSL 516.88■□□□□ 0.296e-7■■■□□ 14.6
DROSHAQ9NRR4 DLK1-204ENST00000555747 538 ntTSL 433.42■■■□□ 2.942e-27■■■□□ 14.6
DROSHAQ9NRR4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.552e-27■■■□□ 14.6
DROSHAQ9NRR4 DLK1-203ENST00000392848 555 ntTSL 424.07■■□□□ 1.442e-27■■■□□ 14.6
DROSHAQ9NRR4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC22.21■■□□□ 1.152e-27■■■□□ 14.6
DROSHAQ9NRR4 ACTR3-204ENST00000446821 818 ntTSL 325.21■■□□□ 1.631e-6■■■□□ 14.6
DROSHAQ9NRR4 ACTR3-203ENST00000443297 566 ntTSL 421.39■■□□□ 1.021e-6■■■□□ 14.6
DROSHAQ9NRR4 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC17.94■□□□□ 0.461e-6■■■□□ 14.6
DROSHAQ9NRR4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■■■□□ 14.6
DROSHAQ9NRR4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC40.06■■■■■ 46e-8■■■□□ 14.6
DROSHAQ9NRR4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.3■■■■□ 3.886e-8■■■□□ 14.6
DROSHAQ9NRR4 AGAP3-209ENST00000469901 582 ntTSL 330.76■■■□□ 2.511e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-205ENST00000424768 1147 ntTSL 418.57■□□□□ 0.561e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-203ENST00000393618 592 ntTSL 418.51■□□□□ 0.551e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-206ENST00000441045 589 ntTSL 416.84■□□□□ 0.291e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-213ENST00000491027 1009 ntTSL 214.84□□□□□ -0.031e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-204ENST00000417537 300 ntTSL 413.83□□□□□ -0.191e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-212ENST00000489732 1976 ntTSL 212.51□□□□□ -0.411e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-211ENST00000489358 581 ntTSL 37.42□□□□□ -1.221e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.15□□□□□ -1.261e-6■■■□□ 14.6
DROSHAQ9NRR4 NAMPT-210ENST00000486949 1115 ntTSL 21.88□□□□□ -2.111e-6■■■□□ 14.6
DROSHAQ9NRR4 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.77e-16■■■□□ 14.6
DROSHAQ9NRR4 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.747e-16■■■□□ 14.6
DROSHAQ9NRR4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -17e-16■■■□□ 14.6
DROSHAQ9NRR4 RABL6-209ENST00000466096 3949 ntTSL 1 (best)18.77■□□□□ 0.63e-7■■■□□ 14.6
DROSHAQ9NRR4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.282e-7■■■□□ 14.6
DROSHAQ9NRR4 RABL6-210ENST00000484471 2746 ntTSL 527.76■■■□□ 2.032e-7■■■□□ 14.6
DROSHAQ9NRR4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.522e-7■■■□□ 14.6
DROSHAQ9NRR4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.432e-7■■■□□ 14.6
DROSHAQ9NRR4 MAP2K7-205ENST00000468058 1589 ntTSL 240.04■■■■■ 41e-6■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.247e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-214ENST00000548273 818 ntTSL 320.48■□□□□ 0.877e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC19.68■□□□□ 0.747e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC18.68■□□□□ 0.587e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-217ENST00000549988 544 ntTSL 318.56■□□□□ 0.567e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.397e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC17.14■□□□□ 0.347e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC16.98■□□□□ 0.317e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-215ENST00000549479 573 ntTSL 216.58■□□□□ 0.247e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-221ENST00000551600 786 ntTSL 516.38■□□□□ 0.217e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-209ENST00000547704 760 ntTSL 516.38■□□□□ 0.217e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC15.76■□□□□ 0.117e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-207ENST00000547479 623 ntTSL 515.22■□□□□ 0.037e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC14.9□□□□□ -0.027e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC14.36□□□□□ -0.117e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC9.24□□□□□ -0.937e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)9.17□□□□□ -0.947e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.247e-9■■■□□ 14.6
DROSHAQ9NRR4 NAP1L1-218ENST00000550934 851 ntTSL 52.32□□□□□ -2.047e-9■■■□□ 14.6
DROSHAQ9NRR4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC11.8□□□□□ -0.524e-10■■■□□ 14.6
DROSHAQ9NRR4 CBFA2T3-206ENST00000563920 1815 ntTSL 226.43■■□□□ 1.821e-6■■■□□ 14.6
DROSHAQ9NRR4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC25.52■■□□□ 1.683e-7■■■□□ 14.6
DROSHAQ9NRR4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.673e-7■■■□□ 14.6
DROSHAQ9NRR4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.613e-7■■■□□ 14.6
DROSHAQ9NRR4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.323e-7■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.221e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.71e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.371e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-208ENST00000472607 713 ntTSL 322.86■■□□□ 1.251e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-206ENST00000417060 1072 ntAPPRIS ALT2 TSL 1 (best)22.57■■□□□ 1.21e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-210ENST00000491666 1196 ntTSL 522.57■■□□□ 1.21e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.081e-6■■■□□ 14.6
DROSHAQ9NRR4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.911e-6■■■□□ 14.6
DROSHAQ9NRR4 ATP13A3-205ENST00000457986 490 ntTSL 338.25■■■■□ 3.713e-6■■■□□ 14.6
DROSHAQ9NRR4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.713e-6■■■□□ 14.6
DROSHAQ9NRR4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.436e-7■■■□□ 14.6
DROSHAQ9NRR4 UBE2Q1-207ENST00000497453 830 ntTSL 527.35■■□□□ 1.976e-7■■■□□ 14.6
DROSHAQ9NRR4 TLN1-202ENST00000378192 1693 ntTSL 217.53■□□□□ 0.41e-9■■■□□ 14.6
DROSHAQ9NRR4 FBXL19-206ENST00000562798 299 ntTSL 427.75■■■□□ 2.031e-7■■□□□ 14.5
DROSHAQ9NRR4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.156e-8■■□□□ 14.5
DROSHAQ9NRR4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC18.37■□□□□ 0.538e-7■■□□□ 14.5
DROSHAQ9NRR4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.62e-6■■□□□ 14.5
DROSHAQ9NRR4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.07■■■□□ 2.563e-9■■□□□ 14.5
DROSHAQ9NRR4 ASMTL-AS1-204ENST00000443929 574 ntTSL 224.79■■□□□ 1.563e-9■■□□□ 14.5
DROSHAQ9NRR4 CDC34-205ENST00000606065 1062 ntTSL 534.49■■■■□ 3.115e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC33.77■■■■□ 35e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.815e-7■■□□□ 14.5
DROSHAQ9NRR4 COPE-208ENST00000598969 1770 ntTSL 531.85■■■□□ 2.695e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.67■■■□□ 2.665e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC30.31■■■□□ 2.445e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.445e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-208ENST00000518656 1059 ntTSL 1 (best)30.23■■■□□ 2.435e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC29.28■■■□□ 2.285e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC29.09■■■□□ 2.255e-7■■□□□ 14.5
DROSHAQ9NRR4 CDC34-206ENST00000606400 899 ntTSL 228.73■■■□□ 2.195e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC28.7■■■□□ 2.185e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.155e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC28.36■■■□□ 2.135e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC27.77■■■□□ 2.045e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.825e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC24.75■■□□□ 1.555e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.435e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC23.62■■□□□ 1.375e-7■■□□□ 14.5
DROSHAQ9NRR4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC22.73■■□□□ 1.235e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC22.28■■□□□ 1.165e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-209ENST00000518913 2663 ntTSL 1 (best)21.71■■□□□ 1.075e-7■■□□□ 14.5
DROSHAQ9NRR4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20.52■□□□□ 0.885e-7■■□□□ 14.5
DROSHAQ9NRR4 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.19■□□□□ 0.825e-7■■□□□ 14.5
Retrieved 100 of 16,331 protein–RNA pairs in 103.3 ms