Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 AC130371.2-201ENST00000619443 611 ntBASIC20.41■□□□□ 0.86
SIX2Q9NPC8 FAM197Y4-202ENST00000622692 608 ntBASIC20.41■□□□□ 0.86
SIX2Q9NPC8 AL031985.4-201ENST00000642138 673 ntBASIC20.41■□□□□ 0.86
SIX2Q9NPC8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX2Q9NPC8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 AC005082.1-201ENST00000413042 2259 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 MTMR9LP-203ENST00000426597 1545 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 AC011298.2-201ENST00000617989 482 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 HEIH-201ENST00000623091 1652 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 AC068587.9-201ENST00000641814 219 ntBASIC20.4■□□□□ 0.86
SIX2Q9NPC8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX2Q9NPC8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.39■□□□□ 0.86
SIX2Q9NPC8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIX2Q9NPC8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.39■□□□□ 0.86
SIX2Q9NPC8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SIX2Q9NPC8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 B3GAT3P1-201ENST00000471720 806 ntBASIC20.39■□□□□ 0.85
SIX2Q9NPC8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX2Q9NPC8 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.38■□□□□ 0.85
SIX2Q9NPC8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 GCSHP5-201ENST00000443090 522 ntBASIC20.38■□□□□ 0.85
SIX2Q9NPC8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 AC142381.4-202ENST00000563973 229 ntBASIC20.38■□□□□ 0.85
SIX2Q9NPC8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 MIR6786-201ENST00000616843 113 ntBASIC20.38■□□□□ 0.85
SIX2Q9NPC8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIX2Q9NPC8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 KRT8P32-201ENST00000512863 1461 ntBASIC20.37■□□□□ 0.85
SIX2Q9NPC8 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.37■□□□□ 0.85
SIX2Q9NPC8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 KRT8P3-201ENST00000519669 1449 ntBASIC20.37■□□□□ 0.85
SIX2Q9NPC8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SIX2Q9NPC8 FAM197Y1-201ENST00000421178 764 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms