Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.25■□□□□ 0.99
VTA1Q9NP79 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTA1Q9NP79 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 TREX1-205ENST00000625293 1783 ntBASIC21.24■□□□□ 0.99
VTA1Q9NP79 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VTA1Q9NP79 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTA1Q9NP79 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 AC011498.5-201ENST00000592027 486 ntBASIC21.23■□□□□ 0.99
VTA1Q9NP79 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTA1Q9NP79 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.23■□□□□ 0.99
VTA1Q9NP79 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
VTA1Q9NP79 AL109659.2-201ENST00000606809 1674 ntBASIC21.22■□□□□ 0.99
VTA1Q9NP79 TEX21P-204ENST00000641479 1693 ntBASIC21.22■□□□□ 0.99
VTA1Q9NP79 LINC01521-201ENST00000504184 1943 ntBASIC21.22■□□□□ 0.99
VTA1Q9NP79 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
VTA1Q9NP79 MIR3917-201ENST00000580971 93 ntBASIC21.22■□□□□ 0.99
VTA1Q9NP79 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.22■□□□□ 0.99
VTA1Q9NP79 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VTA1Q9NP79 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTA1Q9NP79 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTA1Q9NP79 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTA1Q9NP79 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTA1Q9NP79 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 HLA-F-220ENST00000434407 884 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.21■□□□□ 0.99
VTA1Q9NP79 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VTA1Q9NP79 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTA1Q9NP79 AL121672.3-201ENST00000608644 468 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 AC092119.3-201ENST00000612618 583 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 AC079602.3-201ENST00000623931 403 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 AL157888.1-201ENST00000631930 593 ntBASIC21.21■□□□□ 0.99
VTA1Q9NP79 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms