Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 KRT18P22-201ENST00000402024 1347 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 MTND4P13-201ENST00000402078 1023 ntBASIC21.03■□□□□ 0.96
RNF39Q9H2S5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 AC135279.1-201ENST00000543493 504 ntBASIC21.03■□□□□ 0.96
RNF39Q9H2S5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 AC090330.1-201ENST00000588646 764 ntBASIC21.03■□□□□ 0.96
RNF39Q9H2S5 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF39Q9H2S5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 KRT18P57-201ENST00000443599 1254 ntBASIC21.02■□□□□ 0.96
RNF39Q9H2S5 FAM207BP-201ENST00000447172 505 ntBASIC21.02■□□□□ 0.96
RNF39Q9H2S5 IL12A-205ENST00000480787 863 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF39Q9H2S5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RNF39Q9H2S5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF39Q9H2S5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF39Q9H2S5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 TSPY14P-201ENST00000303979 915 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC113347.1-201ENST00000413321 391 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 BMS1P13-201ENST00000417301 885 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 BMS1P11-201ENST00000442351 885 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 BMS1P9-201ENST00000457640 885 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 ECEL1P2-202ENST00000465689 757 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 AC139792.2-201ENST00000624218 587 ntBASIC21.01■□□□□ 0.95
RNF39Q9H2S5 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF39Q9H2S5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 LBX2-AS1-202ENST00000603175 2083 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNF39Q9H2S5 TERF1P1-201ENST00000311003 1181 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF39Q9H2S5 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF39Q9H2S5 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC21■□□□□ 0.95
RNF39Q9H2S5 SLC25A3P1-201ENST00000443844 931 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 MTND1P36-201ENST00000522384 936 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms