Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 TEX21P-204ENST00000641479 1693 ntBASIC20.27■□□□□ 0.84
CASD1Q96PB1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 AC026396.1-201ENST00000419388 421 ntBASIC20.27■□□□□ 0.84
CASD1Q96PB1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 HLA-F-220ENST00000434407 884 ntBASIC20.27■□□□□ 0.84
CASD1Q96PB1 TSSC2-201ENST00000450217 709 ntBASIC20.27■□□□□ 0.84
CASD1Q96PB1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.27■□□□□ 0.84
CASD1Q96PB1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASD1Q96PB1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASD1Q96PB1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CASD1Q96PB1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MIR3180-1-201ENST00000580374 94 ntBASIC20.26■□□□□ 0.83
CASD1Q96PB1 MIR3180-3-201ENST00000584616 94 ntBASIC20.26■□□□□ 0.83
CASD1Q96PB1 AC092329.2-201ENST00000598402 547 ntBASIC20.26■□□□□ 0.83
CASD1Q96PB1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.26■□□□□ 0.83
CASD1Q96PB1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASD1Q96PB1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 BX276092.5-203ENST00000456199 560 ntBASIC20.25■□□□□ 0.83
CASD1Q96PB1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 MIR3917-201ENST00000580971 93 ntBASIC20.25■□□□□ 0.83
CASD1Q96PB1 AL121672.3-201ENST00000608644 468 ntBASIC20.25■□□□□ 0.83
CASD1Q96PB1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.25■□□□□ 0.83
CASD1Q96PB1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 AL162741.1-201ENST00000565563 1558 ntBASIC20.25■□□□□ 0.83
CASD1Q96PB1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASD1Q96PB1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 AP002383.4-201ENST00000442518 975 ntBASIC20.24■□□□□ 0.83
CASD1Q96PB1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms