Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SNX27Q96L92 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.5■□□□□ 0.87
SNX27Q96L92 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.5■□□□□ 0.87
SNX27Q96L92 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SNX27Q96L92 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNX27Q96L92 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.5■□□□□ 0.87
SNX27Q96L92 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
SNX27Q96L92 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.5■□□□□ 0.87
SNX27Q96L92 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 IRX1P1-201ENST00000438849 1838 ntBASIC20.5■□□□□ 0.87
SNX27Q96L92 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX27Q96L92 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX27Q96L92 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.49■□□□□ 0.87
SNX27Q96L92 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNX27Q96L92 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
SNX27Q96L92 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNX27Q96L92 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.49■□□□□ 0.87
SNX27Q96L92 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.49■□□□□ 0.87
SNX27Q96L92 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 AL032819.2-201ENST00000624543 2162 ntBASIC20.49■□□□□ 0.87
SNX27Q96L92 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SNX27Q96L92 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX27Q96L92 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX27Q96L92 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX27Q96L92 GPAT2P1-201ENST00000444924 1672 ntBASIC20.48■□□□□ 0.87
SNX27Q96L92 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX27Q96L92 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
SNX27Q96L92 AC007952.6-201ENST00000573168 2673 ntBASIC20.48■□□□□ 0.87
SNX27Q96L92 AC003957.1-201ENST00000625108 2673 ntBASIC20.48■□□□□ 0.87
SNX27Q96L92 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX27Q96L92 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SNX27Q96L92 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX27Q96L92 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.48■□□□□ 0.87
SNX27Q96L92 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX27Q96L92 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.48■□□□□ 0.87
SNX27Q96L92 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.48■□□□□ 0.87
SNX27Q96L92 AC139887.4-201ENST00000607877 719 ntBASIC20.48■□□□□ 0.87
SNX27Q96L92 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNX27Q96L92 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNX27Q96L92 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX27Q96L92 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 FEM1AP3-201ENST00000403722 1741 ntBASIC20.47■□□□□ 0.87
SNX27Q96L92 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX27Q96L92 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNX27Q96L92 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 AK4P3-201ENST00000418260 669 ntBASIC20.47■□□□□ 0.87
SNX27Q96L92 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.47■□□□□ 0.87
SNX27Q96L92 COX11P1-201ENST00000489116 835 ntBASIC20.47■□□□□ 0.87
SNX27Q96L92 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX27Q96L92 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms