Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TIMD4Q96H15 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMD4Q96H15 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TIMD4Q96H15 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TIMD4Q96H15 SDHAP1-207ENST00000440850 2000 ntBASIC15.97■□□□□ 0.15
TIMD4Q96H15 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMD4Q96H15 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.97■□□□□ 0.15
TIMD4Q96H15 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMD4Q96H15 Z82202.1-201ENST00000623446 1880 ntBASIC15.97■□□□□ 0.15
TIMD4Q96H15 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMD4Q96H15 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TSPY23P-201ENST00000440136 739 ntBASIC15.96■□□□□ 0.15
TIMD4Q96H15 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 AC010203.1-204ENST00000548782 407 ntBASIC15.96■□□□□ 0.15
TIMD4Q96H15 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TIMD4Q96H15 PCDHAC2-203ENST00000615316 3011 ntBASIC15.96■□□□□ 0.15
TIMD4Q96H15 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMD4Q96H15 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
TIMD4Q96H15 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TIMD4Q96H15 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TIMD4Q96H15 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TIMD4Q96H15 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMD4Q96H15 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TIMD4Q96H15 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 AC073508.3-201ENST00000619697 1419 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 INGX-201ENST00000359239 846 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 AP000523.1-201ENST00000398242 1049 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 AP003041.3-201ENST00000527151 707 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 AL031432.5-201ENST00000641059 760 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms