Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 PRSS44-201ENST00000515154 1146 ntBASIC18.55■□□□□ 0.56
ATL1Q8WXF7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 AC098818.2-201ENST00000564925 2320 ntBASIC18.55■□□□□ 0.56
ATL1Q8WXF7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATL1Q8WXF7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.54■□□□□ 0.56
ATL1Q8WXF7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.54■□□□□ 0.56
ATL1Q8WXF7 AC012618.2-201ENST00000428058 849 ntBASIC18.54■□□□□ 0.56
ATL1Q8WXF7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 TMEM191A-211ENST00000637163 1067 ntBASIC18.54■□□□□ 0.56
ATL1Q8WXF7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 RCC2P6-201ENST00000526625 1557 ntBASIC18.54■□□□□ 0.56
ATL1Q8WXF7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATL1Q8WXF7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 RPS2P55-201ENST00000397318 883 ntBASIC18.53■□□□□ 0.56
ATL1Q8WXF7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 AC107956.1-201ENST00000494359 873 ntBASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
ATL1Q8WXF7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATL1Q8WXF7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms