Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 KRT8P11-201ENST00000409686 1436 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 FEM1AP3-201ENST00000403722 1741 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AL355355.2-201ENST00000442321 338 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 SNORA78-201ENST00000459373 127 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AC026471.5-201ENST00000615068 467 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 REXO1L10P-201ENST00000615707 1290 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 REXO1L12P-201ENST00000622156 912 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 BCL2-203ENST00000589955 5011 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AP000974.1-201ENST00000623909 2387 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 AC087289.5-201ENST00000586076 3175 ntBASIC16.63■□□□□ 0.25
CPEB3Q8NE35 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 FP475955.4-201ENST00000623131 1990 ntBASIC16.62■□□□□ 0.25
CPEB3Q8NE35 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPEB3Q8NE35 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 FAM207BP-201ENST00000447172 505 ntBASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 AP003071.4-201ENST00000562276 1284 ntBASIC16.61■□□□□ 0.25
CPEB3Q8NE35 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPEB3Q8NE35 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms