Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 KSR1P1-201ENST00000446298 240 ntBASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 AC113410.3-201ENST00000623366 203 ntBASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 AC008040.2-201ENST00000461049 708 ntBASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 AC008550.1-201ENST00000511500 884 ntBASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 AC233702.5-201ENST00000584107 538 ntBASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 AC073195.1-201ENST00000607241 877 ntBASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 FP475955.4-201ENST00000623131 1990 ntBASIC17.9■□□□□ 0.46
SIMC1Q8NDZ2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SIMC1Q8NDZ2 KRT16P1-201ENST00000399124 1418 ntBASIC17.89■□□□□ 0.46
SIMC1Q8NDZ2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIMC1Q8NDZ2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIMC1Q8NDZ2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 AL353807.1-201ENST00000427475 662 ntBASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 CD177P1-201ENST00000606252 935 ntBASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIMC1Q8NDZ2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 AC011506.1-201ENST00000474329 610 ntBASIC17.88■□□□□ 0.45
SIMC1Q8NDZ2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms